[Mon Aug 29 17:04:20 2016] >Input file: TMA0A045IY28M1G.pdb >TM segments: 434-457_ 517-525_ 549-562 MAIDEN score = 12.9291 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V524 -E550 3.70324301247439 V524 -R551 1.15080339355138 E521 -Y553 0.889581350080467 V524 -F549 0.887983038964269 P519 -R555 0.777121820225352 V522 -E550 0.776720376245828 M448 -F454 0.72160824563798 F517 -V556 0.691045550870912 F517 -V560 0.685899191814052 F454 -G552 0.66860419083165 V522 -Y553 0.667756588792065 V522 -G552 0.66751308836074 F517 -N561 0.636736849051541 V525 -E550 0.608647918830658 V522 -R551 0.59656044756546 F517 -M559 0.581301395834086 Q445 -L450 0.568500247058223 A456 -Y553 0.523836802885139 V522 -F549 0.490669801226378 F454 -R551 0.488142248639176 P519 -E550 0.480535752706784 E521 -G552 0.479401705581659 Y449 -R551 0.459090284317432 P519 -A557 0.439763330119753 L450 -R551 0.432637943709269 V525 -G552 0.432323391255711 F517 -R555 0.42112325383867 Q518 -D558 0.392310765015282 R523 -F549 0.385731776241239 F517 -A557 0.382315121334917 G520 -V554 0.357469535326431 G451 -Y553 0.345500950932232 M448 -G552 0.344603838080736 E436 -Q445 0.331004201365742 K441 -P447 0.329510140237047 F517 -D558 0.325533538033382 A456 -G520 0.303388784450599 P447 -Y553 0.297648361543577 Y452 -V525 0.292734673700697 R555 -N561 0.276532893421833 Y452 -V524 0.275221529641027 A453 -Y553 0.264440429728792 E521 -E550 0.255415781489868 Y449 -R523 0.254803508870124 G451 -R551 0.252595657008456 R555 -V560 0.248836076369685 Q518 -N561 0.243453398380826 F454 -Y553 0.242699421387018 P519 -Y553 0.239418882283113 D442 -V525 0.228766326615525 I446 -V525 0.222285293802853 R437 -M448 0.208000139114665 M457 -R555 0.207431537010111 M448 -R523 0.203746437394043 A453 -F549 0.201653010486521 K441 -Y449 0.198879798250773 Q434 -R555 0.197929145206082 K441 -I446 0.191959946648232 A453 -R523 0.191625116320343 R455 -V556 0.191621237394377 V554 -M559 0.191116075507551 G520 -V525 0.18843729592433 R455 -V522 0.186663160421623 I446 -G451 0.185259681767881 R437 -R455 0.181421743185957 E436 -R443 0.179146003785814 Q445 -G552 0.178549367216661 P519 -N561 0.174919587548512 P519 -R551 0.171265320552002 R455 -V525 0.166496440918201 G552 -A557 0.164752637419905 G451 -A456 0.16420917560866 P447 -F454 0.160748480231226 V524 -V554 0.159353992494443 R455 -V524 0.156138371387842 A444 -R455 0.149801160263194 R455 -A557 0.148940652892669 M448 -V525 0.147881306195778 M448 -A453 0.147630607327832 A456 -R551 0.143621057993505 Y449 -R455 0.143015209937372 Y452 -R551 0.140856605800124 R455 -Y553 0.139688687464883 Q434 -R443 0.136665328199117 R437 -Q445 0.133985575030367 Y449 -Y553 0.133117376951414 Q434 -Y439 0.13132243456579 F454 -G520 0.129608882951884 A444 -Y452 0.128556692303911 E521 -V554 0.124122957105702 V525 -V556 0.123577377992878 P519 -V524 0.123550533503624 R437 -P447 0.120909579187671 I446 -G552 0.120250819300765 Q445 -F549 0.119539584042201 A444 -R551 0.119408255780742 A453 -G520 0.115895183801358 Q445 -F454 0.115527939648341 M457 -G552 0.113703189734899 Y439 -I446 0.112922494415243 E436 -A444 0.106903150044577 A453 -E550 0.104054162983305 Q518 -R523 0.103867420421944 A444 -G451 0.0991515124186305 M457 -P519 0.0986082479766317 Q518 -A557 0.0981584166121223 R523 -R555 0.0980524219166575 Q445 -R523 0.0972262546874525 Q518 -M559 0.0967948580989906 V524 -V556 0.0963750682679736 D442 -L450 0.0944712675545825 A444 -V554 0.0934097384200077 G440 -M448 0.0932093871856932 F517 -Y553 0.0925356457375419 A453 -V524 0.0919127293151655 E521 -A557 0.0908907393961123 L435 -A444 0.0907433093694276 Q445 -A453 0.0901915873258998 Q445 -R551 0.0890155239157036 Q445 -R455 0.0871042330728886 G520 -D558 0.0859462889809004 L450 -R455 0.0835318366605544 G451 -V524 0.0830396998065002 R455 -R523 0.0813494019539958 L435 -Q445 0.0807851479351029 A444 -G552 0.079835651746385 M448 -E550 0.079620024399504 L435 -R443 0.0792888019549802 P447 -R455 0.0789839203755931 V524 -R555 0.0727678654997035 A444 -A453 0.0719012280526807 R523 -R551 0.0708181242050938 A456 -V556 0.0691864498953123 A453 -V554 0.0684960322438259 Y452 -E550 0.0679412093413097 L450 -V524 0.0668529897425012 V525 -R555 0.0592144843136775 R437 -V525 0.0592116923321155 G440 -P447 0.0591050172732159 A453 -R551 0.0579184897601799 A456 -V522 0.057901246716777 F438 -I446 0.0551662470108285 Y439 -P447 0.0541162890579835 Q518 -V554 0.0510811078538467 K441 -V525 0.0483067444250218 P447 -G552 0.0479893605790607 A456 -A557 0.0464483046128281 M457 -F517 0.0453691165809028 F549 -V554 0.0425165037867855 R455 -G520 0.0413924155156478 R437 -R443 0.0405943479313702 V556 -R562 0.0381490487637959 P447 -V524 0.0375669457721766 G520 -F549 0.036815959488731 Q434 -Q445 0.0364964172066133 Q445 -V524 0.0355659244454116 V522 -A557 0.0287231509927741 M457 -V554 0.0251462639387552 P447 -F549 0.0239014340732098 G451 -V522 0.0210074129160729 I446 -V524 0.0171987781312239 L435 -G440 0.0167894884802164 G520 -V560 0.014198682221596 I446 -F454 0.0134600355258099 F438 -M448 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R523 -Y553 -0.661542483597698 Q518 -R555 -0.675506751930382 R523 -E550 -0.703768881986735