[Mon Aug 29 17:04:49 2016] >Input file: TMA0A045J0K4M1G.pdb >TM segments: 43-49_ 59-71_ 153-164_ 268-276_ 307-318 MAIDEN score = 0.9663 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E64 -A161 0.962024871067094 E64 -D157 0.757043202107962 R60 -I160 0.716295253950735 R63 -S162 0.638636651905409 R63 -F158 0.488497492038997 R66 -L71 0.462253597402941 E49 -T59 0.418286148290101 E64 -G159 0.400122233950859 R60 -A161 0.379620700939972 A68 -A161 0.373785665399562 E64 -R70 0.288290508353632 S48 -G317 0.269014192423732 R60 -A163 0.261918798227597 M61 -G159 0.261436292688707 T59 -T67 0.245711800485709 R60 -D157 0.236375155198139 M47 -V156 0.223872388315856 R60 -F158 0.21469566046565 M61 -F158 0.206001215257967 E64 -V156 0.204035342372628 K45 -A316 0.18742298527231 A65 -A161 0.185340374249526 R70 -D157 0.179195423248785 K45 -T313 0.168771625289687 G69 -L155 0.167524838284134 L46 -G318 0.167132161279925 E49 -A316 0.163585467570475 R66 -A163 0.163532698650743 T67 -T164 0.162684713969039 R63 -G159 0.161199338971084 A65 -R70 0.159813476114294 A68 -I160 0.150298422641033 R60 -A68 0.149167693678121 A68 -G159 0.149164231433187 M47 -G159 0.143504675334648 G69 -Y154 0.137508836706573 F158 -A163 0.137024515736904 A65 -S162 0.134631665198642 M47 -G318 0.128009610411154 Y154 -G159 0.125009158969402 M47 -R60 0.124655445648739 R70 -F158 0.123831726637913 T313 -G318 0.122448382335701 S48 -Q62 0.121098194616937 M47 -Q62 0.120371134234157 L46 -G159 0.11934170869569 L155 -A161 0.118586816798392 R66 -S162 0.118540493304205 E49 -G317 0.11574910503684 R60 -T67 0.109369333802912 A43 -R308 0.107692446565049 A271 -A276 0.106568656348657 G69 -F158 0.104686294848621 E64 -F158 0.102807675727527 D157 -S162 0.102222778171637 E49 -R60 0.101343152710282 R63 -R70 0.0990319814823374 A43 -P310 0.0962144340279201 Q62 -F158 0.0954569524349678 R63 -T164 0.0930385892607546 P312 -G317 0.0921423634242853 V156 -A161 0.091618883716762 T59 -R66 0.0909615488850997 A65 -A163 0.085679037593084 M47 -G317 0.0855938683349704 K45 -G159 0.0842082328216476 T67 -A163 0.0841469957975574 R60 -S162 0.0808558890684963 L46 -A68 0.0774935974763054 L44 -F158 0.075750776409417 R63 -A163 0.0756423213191724 R60 -R66 0.0752088090135292 L44 -M61 0.0745272056263211 R63 -V156 0.0738115464462086 A43 -A68 0.0720897741038962 E49 -M61 0.0697275465083124 L46 -Q62 0.0681265261293249 M47 -I160 0.0648034535894233 K45 -F158 0.064545814240045 R70 -A163 0.0635918611499052 A153 -F158 0.0621159903317965 A65 -V156 0.0610703560936092 G69 -G159 0.0610660482271894 S48 -T59 0.0574731897206737 M61 -L155 0.0550739539746163 L46 -W315 0.0541975477860097 R63 -L155 0.0537373517540978 L46 -R60 0.0531060271599211 M47 -T59 0.0524377328642353 G69 -A161 0.0512739568885934 T59 -A163 0.05104609029903 T59 -A161 0.0498610573712082 T67 -L155 0.0489540630022613 L71 -A153 0.0482196009017493 M61 -A163 0.0472752491893371 M47 -F158 0.0437842613986023 S48 -G159 0.0431566026261514 K45 -A68 0.0425530110648893 M61 -V156 0.0417874662385391 M61 -L71 0.040608080192353 R66 -V156 0.0392092604888201 A65 -L155 0.0371090723264351 R60 -G69 0.0359766930279966 L44 -A68 0.0359412010267439 R63 -A68 0.035452219208139 L44 -D157 0.0351360855674461 L46 -G317 0.0339341690832233 M47 -A316 0.0335968049220066 Q62 -T164 0.0333972465743873 L71 -A161 0.0331032091088611 A43 -L155 0.0276419032203981 L46 -E64 0.0274019223723831 E64 -L71 0.0268946568853661 R308 -T313 0.0249752213930186 L46 -D157 0.0202995370144696 E49 -Q62 0.0197742726635943 A68 -S162 0.0178940222587265 Q62 -D157 0.0177275008396178 E64 -I160 0.0158290034280615 T59 -D157 0.0136395182887963 T67 -G159 0.0131469464843277 R66 -G159 0.012899836068164 A153 -T307 0.0119735441924445 E64 -T164 0.0105419049034277 L46 -V156 0.010268515213208 S48 -P314 0.0101324251963995 M61 -R66 0.00615910749827409 T59 -F158 0.00481771408621956 L46 -T59 0.00464586146229828 Q62 -A163 0.00289173388335628 R66 -A161 0.0022598109915215 R70 -Y154 0.00172261074736033 Q62 -V156 4.99037798817881e-06 R66 -D157 -0.000980084683412707 E49 -G159 -0.00269076274457092 L155 -S162 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R60 -V156 -0.107105797124517 T67 -S162 -0.110784899054775 G69 -D157 -0.111940931899901 R70 -A161 -0.112526908820129 L46 -F158 -0.115959975363881 M61 -R70 -0.121015213511736 D157 -A163 -0.128342299032026 M61 -A161 -0.128510469975698 A65 -D157 -0.130977454264681 G69 -V156 -0.133035882269151 R60 -A65 -0.137347893661393 M61 -S162 -0.146811739135175 R70 -L155 -0.151907581228175 M47 -D157 -0.153316406181225 Q62 -T67 -0.156628387943979 L71 -F158 -0.160414346780239 L71 -A163 -0.1634920106655 R66 -L155 -0.165812603888048 M47 -T313 -0.167730912419103 R70 -V156 -0.172145316955277 K45 -M61 -0.175502201560474 K45 -D157 -0.177026369313868 T59 -E64 -0.182315527081828 Q62 -A161 -0.187609828949535 A65 -G159 -0.188519791772427 T67 -D157 -0.192274466464303 T67 -F158 -0.192322145082366 K45 -Q311 -0.197563104380368 K45 -L155 -0.198042152588928 M61 -A68 -0.201695706478638 K45 -R308 -0.202875776798865 M47 -R63 -0.206072540657546 E49 -G318 -0.206313038309782 E64 -G69 -0.206520965052575 M47 -M61 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