[Fri Aug 26 17:09:34 2016] >Input file: TMA0A049E9U3M1D.pdb >TM segments: 71-94_ 113-128 MAIDEN score = -7.7447 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I84 -F90 1.1769217419153 V85 -W91 0.923557944294035 I84 -W91 0.75731565148133 A83 -F90 0.662302195552385 V85 -F90 0.641149827459334 V85 -A92 0.435188989297178 E116 -P123 0.435170556132211 I84 -I89 0.426527759764208 A83 -I89 0.373908102787438 G82 -A92 0.330306453948916 V80 -V85 0.280034190920944 E116 -F124 0.274168516188309 P114 -P123 0.250942284255849 E116 -V121 0.243992255303793 L115 -P123 0.226247442195866 V80 -I89 0.225640326282353 L88 -S93 0.215120540172189 Y86 -A92 0.214730410745822 A83 -S93 0.188618935534222 M113 -V118 0.182560349976959 V80 -F90 0.172010777706626 V75 -G82 0.169376137366604 A77 -V85 0.167913610574352 I76 -T120 0.161255206609775 W71 -I126 0.159931921693144 T120 -L125 0.157355949998856 G73 -A83 0.145631017092119 T120 -I127 0.116186684503947 G73 -T122 0.115348051790046 A83 -A94 0.112199058499315 A83 -L115 0.106946082219396 A77 -I84 0.106415351350837 A74 -G82 0.106376110786914 A74 -L79 0.0915130664543007 V75 -I126 0.0901453073076298 V118 -I126 0.0894973662115994 G73 -V81 0.0879518013398357 L117 -I126 0.0866675038292013 T122 -S128 0.0850324785923402 I76 -V85 0.0735406369920235 M113 -T122 0.0731467268771128 G73 -G82 0.0717863519251109 L79 -P123 0.0698716038311105 G73 -L125 0.0692661971674813 L79 -L88 0.067074131387848 L79 -L115 0.064815594140466 A83 -W91 0.064191218852061 A74 -I126 0.0609169269754588 I76 -F124 0.055879235793622 V80 -P123 0.0548050963248121 V81 -L88 0.0537356706452048 V121 -I127 0.0531081421995285 S78 -Y86 0.0522119404490842 I76 -L125 0.0505811102356999 L119 -I127 0.0454111110694431 G73 -S128 0.041981902616265 G73 -P123 0.0383069633263513 W71 -I127 0.0365887458536251 I72 -S128 0.0338785635323369 V80 -G87 0.0333492727334965 G73 -I127 0.0329496652576062 A74 -T122 0.0328706923785625 A77 -I126 0.0317422351100864 G82 -S93 0.0309029002338033 I72 -V121 0.0243732183766223 P114 -L119 0.0231695251494877 L79 -G87 0.0224045691863504 V81 -W91 0.0194619120584297 L79 -V118 0.019454762862543 Y86 -W91 0.0159145146344066 V80 -L115 0.0148576601168973 G73 -F124 0.00587870034635651 V75 -L125 0.00382761078064053 L119 -F124 0.00318936558884442 A77 -P123 0.00312073576651173 L79 -T122 0.00288748930095117 S78 -V85 0.000578365924589264 A74 -P123 -0.000570895933982296 L79 -F90 -0.00130577972286128 L79 -T120 -0.00231055851589734 A83 -L88 -0.00356997169948015 V75 -P123 -0.00498841752727008 V81 -A92 -0.00877220508132304 L79 -W91 -0.0136874295561746 V75 -T122 -0.0148353330396791 P114 -T120 -0.0160963494600965 Y86 -S93 -0.0199215170184259 V75 -A83 -0.0235438923509866 G82 -F90 -0.0277628002549113 V80 -W91 -0.0303078189842658 I72 -F124 -0.0304003862957334 L88 -A94 -0.0339894798469884 A77 -T122 -0.0410812404760042 V121 -S128 -0.0429204172830202 I76 -I126 -0.0454899940459201 M113 -T120 -0.0465839967411279 I76 -L119 -0.0492115332884314 I72 -I126 -0.0494209818139302 G73 -S78 -0.0499295329226896 S78 -I89 -0.050273190622196 L117 -P123 -0.0519332908760841 W71 -T122 -0.0550885728735451 G82 -A94 -0.0553982176959211 V81 -I89 -0.0649621676158416 I72 -I127 -0.0708236169992 V80 -L88 -0.0736146048357975 A74 -A83 -0.0785293210179411 I76 -A83 -0.0797255021762133 I72 -L125 -0.0864585281885866 V80 -E116 -0.0872268408057075 Y86 -A94 -0.0890325048578405 I89 -A94 -0.0890676493838178 L119 -I126 -0.0931005337758147 I72 -L119 -0.0994633459724961 G73 -L119 -0.103349071836679 V75 -L119 -0.105216272112296 A77 -Y86 -0.106407069070777 W71 -S128 -0.111229940141488 V80 -T120 -0.112670539214365 L115 -F124 -0.113655062330009 L79 -I89 -0.11525664095212 V80 -T122 -0.115675869442492 I76 -V121 -0.118453517718022 A83 -L119 -0.120575827602171 I72 -T122 -0.122866737158426 W71 -A77 -0.122991026799193 V118 -P123 -0.126242246720864 A74 -V81 -0.127833807020569 V75 -I84 -0.129273297393903 V85 -A94 -0.129322578957858 G87 -A92 -0.130520261304298 I72 -V81 -0.131290342484282 I76 -V118 -0.131839089811681 A77 -G82 -0.13505464588638 V81 -Y86 -0.136007894315052 L117 -F124 -0.139060140438252 T120 -I126 -0.144014528390217 A77 -L119 -0.144651707266342 V118 -F124 -0.149172824160782 I84 -A94 -0.149189360949259 I84 -S93 -0.150738313256642 P114 -T122 -0.15497073558724 V81 -G87 -0.162505107974155 I76 -I127 -0.164892909556867 E116 -L125 -0.165590554844711 I76 -T122 -0.17000630171359 W71 -L79 -0.173718918248759 G82 -L88 -0.175716750056893 G82 -W91 -0.177698224654363 V81 -F90 -0.178281288585086 L79 -Y86 -0.178706479617142 V121 -I126 -0.181413546641265 A77 -A83 -0.181469383301582 W71 -P123 -0.184242150154458 L79 -L119 -0.185007891593942 A83 -A92 -0.187021804329752 W71 -L125 -0.188182952027249 L119 -L125 -0.189508229643324 G73 -L79 -0.190707161759747 G73 -I126 -0.191354332715044 W71 -I76 -0.192529043557141 L117 -L125 -0.196957754068284 G87 -A94 -0.198038405110945 I72 -V80 -0.198335355342699 E116 -T122 -0.199551363945873 G73 -V80 -0.209641043098068 W71 -V80 -0.211601573823585 V118 -L125 -0.211667748606603 P114 -V121 -0.219296306785227 V80 -L119 -0.228868219674257 M113 -V121 -0.231944246210913 G82 -I89 -0.240429326222459 G87 -S93 -0.244233923698012 W71 -S78 -0.244775044095435 I76 -I84 -0.251322031999402 L79 -V85 -0.251850556232363 V75 -V81 -0.257551390000993 L79 -I84 -0.273312512769053 P123 -S128 -0.273641508842924 I72 -P123 -0.279221583450824 I76 -P123 -0.283489342237222 L115 -T122 -0.285024273492731 V80 -Y86 -0.287292189615902 I76 -G82 -0.290440681675857 V75 -V80 -0.297614070928787 I76 -V81 -0.299319613730765 V85 -S93 -0.306675619267976 I84 -A92 -0.311300307544378 L115 -T120 -0.312033961154827 I72 -L79 -0.316836889871053 L117 -T122 -0.328067657353322 I72 -S78 -0.338635645027375 G82 -G87 -0.340044332686126 S78 -I84 -0.340050747034199 A74 -V80 -0.358010081343759 L115 -V121 -0.400510609364267 T122 -I127 -0.411776610133912 I72 -A77 -0.429493030734068 S78 -A83 -0.470770101214912 M113 -L119 -0.481782821101413