[Fri Aug 26 17:09:57 2016] >Input file: TMA0A061IH39M1D.pdb >TM segments: 718-731_ 736-747 MAIDEN score = -4.5657 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I718 -V745 0.900307197817696 K722 -V745 0.726879295073835 I728 -G738 0.702482325982376 L729 -K739 0.667321895303307 F725 -L742 0.527068937179111 K722 -K739 0.467277180476803 F725 -K739 0.41151110352906 A721 -V745 0.388860932510751 E726 -Q737 0.31810571678035 G720 -Y746 0.313032930671764 E730 -H740 0.2998604292053 F725 -N741 0.286490961549586 A721 -L742 0.279487658352186 L729 -H740 0.263135489388984 G738 -Y746 0.261291159741925 G720 -L742 0.251586689024884 P719 -N741 0.228204248729717 G720 -N741 0.211188733372401 F725 -V744 0.206017677974411 P719 -E726 0.194660625978363 K723 -N741 0.19287646760933 E730 -N741 0.191540156421782 Q737 -L742 0.182253948279868 K723 -I728 0.180099356958032 M731 -Q737 0.177847277377117 F725 -V736 0.172943820375297 K739 -F747 0.171969678456915 E726 -K739 0.171422749852237 I718 -Y746 0.14615095810033 L729 -G738 0.146050884034165 K723 -G738 0.143443643085686 V736 -V745 0.134256213702655 K722 -F747 0.126918314758327 I718 -K723 0.123044300116219 C724 -H740 0.117876129746286 I718 -N741 0.11630606752759 L729 -V736 0.11469766909582 K722 -L742 0.100299295573035 C724 -V744 0.0999264461388485 Q737 -F747 0.0987152665556152 I718 -C743 0.0904858930201718 P719 -C724 0.0899420750334001 E726 -Y746 0.0892922366404241 E726 -L742 0.0885244401698717 G720 -V744 0.0822980619456982 A721 -C743 0.0808300990405344 K723 -K739 0.0803684308322214 I728 -H740 0.0776957151083632 M731 -V736 0.0740448706534096 C724 -Y746 0.0700258248535315 G720 -K727 0.0691700301245417 C724 -V736 0.0672459499663668 G720 -G738 0.0627877020484722 E730 -Q737 0.0627294562815823 A721 -E726 0.0624707555195909 F725 -G738 0.060988039290427 C724 -V745 0.0591695122364744 M731 -L742 0.0538378389594401 K723 -E730 0.0509460341581631 A721 -H740 0.0471803660677134 K727 -Q737 0.0465249097546918 I728 -K739 0.0457940095624902 A721 -G738 0.0400046466010968 K722 -Y746 0.0398448890390579 I718 -H740 0.0358234837617974 K723 -H740 0.0345637855131011 K723 -V745 0.0292970867806446 E726 -V736 0.0275308142393802 P719 -V744 0.0261839748503983 E730 -V736 0.0248249703741905 I718 -K739 0.0227042692801738 Q737 -V745 0.0216385888772415 L729 -V745 0.0193827970366112 E730 -L742 0.0182275832115426 K723 -C743 0.0173816633129213 E726 -V745 0.015340515239119 G720 -I728 0.015152221525502 K722 -V736 0.0115867656029209 N741 -Y746 0.00920627714920341 Q737 -C743 0.00830296352564064 F725 -E730 0.00821045348647731 L729 -C743 0.0066605438858085 I718 -K727 0.00196996501368218 K727 -H740 -0.00772480384320673 I728 -V745 -0.00888115023656511 K727 -V745 -0.0138639396994122 A721 -Q737 -0.0142686281648112 F725 -Q737 -0.0154897769943267 H740 -V745 -0.0165413814187014 P719 -L742 -0.0176474247517486 E726 -H740 -0.0181113214534658 A721 -K727 -0.0188522114869825 K722 -I728 -0.022507707530063 C724 -Q737 -0.0235274157318037 F725 -F747 -0.0248712535221411 I718 -E726 -0.025607434990389 G720 -L729 -0.0290267306347971 K722 -H740 -0.0310503586473461 K722 -E730 -0.0349155244346431 A721 -K739 -0.039862076299599 P719 -V745 -0.0429881998153174 A721 -L729 -0.0501626569714295 I728 -Q737 -0.0564229662260121 I718 -L742 -0.0600132279771968 A721 -E730 -0.0663272592517621 N741 -F747 -0.0666918493278627 Q737 -Y746 -0.0682603803617624 K723 -Y746 -0.0691417718944316 K722 -Q737 -0.0749599712723823 A721 -Y746 -0.0812714388305559 A721 -F747 -0.0822970413327866 P719 -F747 -0.0823584132283477 K739 -V744 -0.08249391919255 V736 -V744 -0.0830923731751314 K722 -G738 -0.0836934032908938 P719 -G738 -0.0855685587147549 C724 -C743 -0.0996036067436163 K739 -Y746 -0.102003867371749 P719 -I728 -0.102433979973493 K722 -M731 -0.106047690984468 I718 -G738 -0.107349025263157 K727 -V736 -0.110143187411761 G738 -F747 -0.110429766869415 M731 -G738 -0.112550903710474 E726 -V744 -0.113096147108007 E726 -G738 -0.115631291536987 G720 -V745 -0.115783721428915 G738 -V745 -0.117735251485222 V736 -C743 -0.119227103522727 L729 -N741 -0.132767929955709 K723 -L742 -0.138849628064791 C724 -M731 -0.138852060358142 K722 -N741 -0.139619145271697 G720 -E726 -0.145433308357387 C724 -N741 -0.148688132404032 P719 -Y746 -0.151843350748408 P719 -K727 -0.152830689887181 V736 -N741 -0.156960342327397 K727 -G738 -0.159293853482213 F725 -Y746 -0.160071025876624 A721 -I728 -0.171585182193842 K723 -V744 -0.177038877384987 I728 -V736 -0.177308013290518 K727 -N741 -0.179764404905627 K723 -M731 -0.180896713322482 K727 -L742 -0.181864521618062 A721 -N741 -0.184095999704612 K727 -K739 -0.18702909396047 K723 -L729 -0.187085723311561 K739 -V745 -0.190256932538093 G738 -V744 -0.190734056657 M731 -K739 -0.191226646059343 K722 -C743 -0.192794881348306 G720 -C743 -0.194557417844853 F725 -H740 -0.199517522450437 E730 -G738 -0.201736027342885 E730 -K739 -0.206649452810479 E726 -M731 -0.213132478367141 I718 -F725 -0.214227428352881 I718 -F747 -0.217006243164535 A721 -V744 -0.218552928150015 F725 -M731 -0.223648073596031 G738 -C743 -0.225674955121331 P719 -F725 -0.230396406579281 K722 -L729 -0.231528776496028 Q737 -V744 -0.234684036214556 G720 -F725 -0.24350571486714 K722 -V744 -0.246256033062619 C724 -K739 -0.248446450532293 P719 -C743 -0.249565608839631 F725 -C743 -0.250127395359044 I718 -C724 -0.26598192776844 I728 -C743 -0.267889585641517 C724 -L729 -0.279519049381745 H740 -Y746 -0.287807801685597 E726 -N741 -0.289001015702399 L729 -Q737 -0.297227978779073 C724 -L742 -0.300989270571487 I728 -L742 -0.303034673851641 C724 -G738 -0.305056983952573 K722 -K727 -0.322025808292249 H740 -F747 -0.334919631203714 I728 -N741 -0.33707504897435 V736 -L742 -0.344921406309076 F725 -V745 -0.358740374227314 I718 -V744 -0.365002732763635 L742 -F747 -0.365489634864617 C724 -E730 -0.36821668832305 L729 -L742 -0.370031599396624 E726 -C743 -0.565773946170154