[Fri Aug 26 17:15:00 2016] >Input file: TMA0A069DMS9M2D.pdb >TM segments: 54-75_ 81-98 MAIDEN score = -12.5384 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I60 -F94 1.12857661163661 I60 -D93 0.790500160384244 N63 -V91 0.670732506062713 C67 -L87 0.61479742830743 A64 -V91 0.580212082929397 G59 -S97 0.579156146553012 G59 -F94 0.523978981142086 A64 -F94 0.502948347698029 I66 -L87 0.468583289510896 C67 -C95 0.463178828926889 F70 -E83 0.43175529659558 F70 -L87 0.422954407813799 F61 -I66 0.419723048772601 N63 -A90 0.405476222859574 C67 -K75 0.380145776922353 M56 -I98 0.349837389562778 G71 -A90 0.327309841617512 V55 -S97 0.317170994865839 G59 -L89 0.289463992921895 G62 -L89 0.272535199645447 I60 -S65 0.26452646991495 C67 -V91 0.254634828503582 H74 -L87 0.253736883610541 Y88 -D93 0.250303926585245 I66 -A90 0.244723158195651 A64 -Y88 0.240317368682635 I66 -V84 0.231664001944608 G62 -S97 0.230056817827228 G62 -C69 0.213236059467144 L58 -S97 0.206095177581833 N63 -L89 0.203119246972063 V55 -C95 0.197445225576828 V55 -F94 0.197306930441357 L58 -N63 0.192315349579896 A64 -A90 0.190156149202038 S65 -S97 0.188762605890743 Y68 -E83 0.181923618238832 G62 -Y88 0.180229533451156 N63 -G71 0.179432385687286 G59 -Y68 0.178075791159782 N63 -Y68 0.174810913704574 F61 -V91 0.171789884261513 S65 -Y88 0.168330501063933 Y68 -V92 0.165327329983346 L58 -C67 0.160184649458619 G71 -L85 0.138092812945817 M56 -V92 0.136915937892901 I86 -C95 0.135591574888149 C67 -S82 0.133894229852554 M56 -S65 0.133018124544404 N63 -E83 0.127517484726033 C69 -L85 0.122825202948693 G62 -L87 0.120414366704775 F70 -V84 0.12020978455075 I60 -V91 0.118972355269747 V55 -D93 0.118477562802749 F73 -E83 0.117381135035459 H74 -V81 0.11429769316329 A64 -L85 0.112918514079423 L58 -C95 0.110553105102905 G71 -I86 0.110300892947027 G62 -F94 0.110004452734398 G62 -A96 0.106535363913231 L72 -L87 0.105290754086372 C67 -Y88 0.101897573962771 N63 -L85 0.100447632537708 E83 -Y88 0.0994383221315629 A64 -A96 0.0980191669909667 C67 -S97 0.0975464934242302 L72 -V84 0.0969827232266636 V81 -A90 0.0950551510029234 K75 -S82 0.0941149279001903 K75 -V81 0.0929595199654885 S82 -A90 0.0915886689749126 L58 -L89 0.0912405765848252 S65 -D93 0.0907555783106682 A64 -V84 0.0905879181476892 A64 -C95 0.0901640804282823 C69 -A90 0.0887515559840844 I66 -D93 0.0885912358915008 S65 -C95 0.088318221916288 V55 -V92 0.0882397846433518 C69 -I86 0.0871026889451726 A64 -L72 0.0861398354751817 Y68 -H74 0.0855338250606925 G71 -V81 0.0833726353824175 C69 -S82 0.080257719528663 I86 -V91 0.0798988345377021 G71 -S82 0.0794699473409177 M56 -S97 0.0786445943220597 I60 -Y88 0.0771630235994634 I86 -D93 0.0762322796370747 V55 -N63 0.0760583577550979 G62 -G71 0.0753127553293816 F61 -L87 0.0735642181816687 G62 -C95 0.0725041840687801 I60 -A96 0.0719289322555623 I66 -G71 0.0711275042314323 F61 -F70 0.0676430787466042 F61 -Y88 0.0670204088659396 L72 -E83 0.0665712889890699 H74 -S82 0.0653205693664064 N63 -F94 0.0652548103601731 I57 -A64 0.0621212291680067 C69 -L89 0.0611261919916517 A64 -F73 0.0592816090514923 I60 -L87 0.0563526739827314 C69 -V84 0.0514175486514361 H74 -I86 0.0495187064357714 N63 -F70 0.0491322385127152 F61 -C95 0.0479821754772267 L89 -S97 0.0446203217092942 M56 -F94 0.0445258147567102 F61 -L89 0.0437932580652447 L54 -G62 0.0431501679864188 L54 -A96 0.042205469820296 G59 -A64 0.0402655913464347 G59 -L87 0.0381391363915553 V84 -L89 0.0378974641049084 L54 -I98 0.0371446867179701 F73 -L87 0.0285531273361532 M56 -A64 0.0274650211300544 L85 -D93 0.0265136972536577 S65 -L89 0.0263697588422143 L72 -V91 0.02545049126587 K75 -V84 0.0254461714027198 M56 -C95 0.0254241232230643 Y88 -A96 0.0253853041916989 D93 -I98 0.0253160942299718 F61 -V92 0.0249811836484215 F70 -F94 0.024606338498637 I60 -S97 0.0218062338508895 N63 -L87 0.0217143522043787 G59 -D93 0.0206663926069659 V81 -L89 0.017512232432189 V55 -A64 0.0167818513097977 I66 -H74 0.0161766263320169 C67 -A96 0.0154615648937373 S65 -E83 0.0152225800323986 G62 -D93 0.0140736946655622 V84 -V92 0.0136146365605558 E83 -V91 0.0135215068073827 Y68 -K75 0.0125577436825702 G59 -C67 0.0120237320530381 S65 -F73 0.0114234659697486 N63 -I98 0.009581747867353 A64 -I86 0.00635929433208293 S65 -H74 0.0060543490633338 G62 -I86 0.004507291384241 F73 -V84 0.00408383527259504 G62 -L72 0.00408333801756466 E83 -L89 0.00282259228484971 L85 -A90 0.000701099444721187 I57 -C95 -0.001256391545994 N63 -V84 -0.005600830168766 F70 -V91 -0.00892754516867722 M56 -A90 -0.0118572051126959 S65 -I86 -0.0134868270822035 L89 -F94 -0.0156658828189968 S82 -V91 -0.0219049078556208 M56 -A96 -0.0228754844846215 G62 -I98 -0.0252933713116477 C67 -A90 -0.0266481957632791 V84 -V91 -0.0267978378699523 V55 -I98 -0.0268511507702298 F61 -C69 -0.0270019992249724 V55 -A90 -0.0286973423694841 S65 -V84 -0.0296273250186871 Y68 -C95 -0.0301523860382105 G71 -L89 -0.0318918259398976 L87 -F94 -0.0336650957773008 F61 -A96 -0.0342203263795611 F61 -G71 -0.0345377380945266 F61 -C67 -0.0347778301803068 M56 -V91 -0.037438195127617 I86 -F94 -0.0384171394507877 H74 -Y88 -0.0430816687008628 Y68 -V84 -0.0460897538444485 S65 -V92 -0.0465347812750561 I66 -V91 -0.0475569660770105 I66 -S97 -0.0477306433351856 F70 -K75 -0.050425890916634 V92 -S97 -0.0516730530776149 Y68 -L87 -0.0532482718394407 C67 -I86 -0.0558289960073992 V55 -I60 -0.0566307827526824 G62 -F70 -0.0570295444723037 F61 -D93 -0.0577324065176015 S82 -Y88 -0.0597222793952299 I57 -A96 -0.060854383337567 F70 -A90 -0.0610007170034591 G62 -V91 -0.0612003606184519 I60 -Y68 -0.0628329095494342 I66 -L89 -0.063994970372276 G71 -Y88 -0.0639950699018468 Y68 -I86 -0.0675769970408506 V55 -S65 -0.0683359584123808 I60 -I98 -0.0709494962604271 F61 -S97 -0.0726567046334421 A64 -I98 -0.0730921465928942 L85 -F94 -0.0740937571928253 L72 -I86 -0.0755531275562227 L72 -Y88 -0.0784017069066127 F61 -I98 -0.0792803657637879 G62 -V92 -0.0794663096247001 G59 -Y88 -0.0797080119381235 L58 -A64 -0.0801376088087213 L58 -Y68 -0.0805925488524455 C69 -L87 -0.0832045057656474 Y88 -S97 -0.0840276761626804 F70 -L85 -0.0841623343208742 A64 -G71 -0.0859748156875124 I57 -S65 -0.0871955076444523 N63 -A96 -0.0874313652467137 C69 -V91 -0.087776222653968 I66 -F73 -0.0883643269379442 L89 -I98 -0.0897514857980699 A90 -I98 -0.0898211258239572 L58 -I66 -0.0916643582147083 Y68 -L89 -0.091719786567793 I66 -L85 -0.0924260392495229 I60 -L89 -0.0926436393623642 A64 -E83 -0.0931708043168231 L54 -F61 -0.0942059611175359 L58 -A96 -0.0949368891698241 L72 -A90 -0.0957643877440768 Y68 -F73 -0.0959764173330893 L58 -V91 -0.0975844923992568 Y68 -D93 -0.0987342074855015 L58 -I98 -0.100876574605535 A64 -S97 -0.102438731339999 E83 -V92 -0.102848987870277 L58 -V92 -0.103773076799209 L87 -C95 -0.105949338123779 L58 -A90 -0.10630802929814 F70 -V81 -0.106453642781906 F73 -I86 -0.107948676235029 G59 -I86 -0.108889686437711 S82 -L89 -0.110024411646005 A64 -L87 -0.110200341966548 I66 -S82 -0.11376598634093 H74 -E83 -0.114682673005758 A64 -F70 -0.115131335303882 Y68 -F94 -0.115448065869309 L89 -C95 -0.118685497748855 N63 -D93 -0.119754946654801 M56 -N63 -0.119974677440725 S65 -G71 -0.120838247686236 I57 -A90 -0.122885215209108 L54 -F94 -0.126368822449879 G59 -I98 -0.128654542252564 A64 -D93 -0.129900640016468 F70 -V92 -0.130224244785251 N63 -C69 -0.133724822693703 G71 -E83 -0.134232502911795 N63 -V92 -0.134786977071728 G71 -V91 -0.135052963505551 L58 -D93 -0.13532427274806 C67 -F73 -0.135577966933019 G59 -V91 -0.136158012319913 F70 -S82 -0.136714891759113 A64 -V92 -0.137982400001956 V55 -G62 -0.138096714776017 C67 -V81 -0.138533336510187 M56 -D93 -0.138882046752969 S65 -F94 -0.140733272216252 L54 -S97 -0.141048595445396 G59 -S65 -0.142303962409579 C67 -L72 -0.142466867244263 C67 -H74 -0.14326713033489 I66 -F94 -0.143579789120426 N63 -C95 -0.146162169972064 I66 -Y88 -0.146257451536589 G59 -V92 -0.147043860195842 L87 -A96 -0.147052389132192 F70 -L89 -0.147646071610717 I57 -I66 -0.152534922294825 C69 -F94 -0.154661518951636 K75 -E83 -0.155415313895902 G59 -C95 -0.159316511611673 E83 -A90 -0.16053949998747 I66 -C95 -0.160893630484292 L54 -D93 -0.161316578084417 V55 -A96 -0.161854710833756 L89 -A96 -0.163447369986502 F61 -Y68 -0.164608355115951 L85 -V91 -0.166146395989078 L87 -V92 -0.167102993979885 I57 -D93 -0.168531918162959 G62 -Y68 -0.171502487109938 C67 -L89 -0.172194584678984 I57 -F94 -0.172493137678554 M56 -F61 -0.174100188179043 I60 -C69 -0.174755285778185 F70 -Y88 -0.174948404815173 C67 -V92 -0.177297023868996 L85 -V92 -0.178511128285116 Y88 -F94 -0.179420844394633 L58 -F94 -0.179437179203791 N63 -L72 -0.180426233769397 G62 -C67 -0.180723792625491 I57 -G62 -0.182740497828303 M56 -G62 -0.184115619553561 I66 -E83 -0.184136778485762 V81 -L87 -0.184198042165448 L54 -N63 -0.189804167028952 S65 -L87 -0.190160806859476 A90 -S97 -0.19345424449974 Y68 -L85 -0.195757454627254 I57 -I98 -0.198671028674497 I66 -I86 -0.199724761949373 G62 -A90 -0.200846936080417 I60 -V92 -0.201010128439086 C67 -L85 -0.201386526817695 V91 -I98 -0.201746256888718 C69 -H74 -0.203352243637175 G71 -V84 -0.205151469590762 I57 -S97 -0.20565529151977 V91 -S97 -0.209545736321601 L54 -G59 -0.21303218630254 I66 -V92 -0.215661954912143 I60 -C95 -0.218934572682832 L58 -S65 -0.219049448300338 Y88 -C95 -0.225551043022182 A90 -A96 -0.231422885381153 H74 -L85 -0.233802192738552 K75 -L87 -0.235811839892231 A64 -C69 -0.236264284692179 N63 -I86 -0.245454416685752 V84 -A90 -0.24862587025287 G59 -I66 -0.248746370808515 F61 -F94 -0.252059362411268 G59 -A90 -0.252113541187688 Y68 -A90 -0.257620880409991 C69 -E83 -0.262736387753188 V81 -Y88 -0.271677680655468 V84 -D93 -0.271706596170944 I60 -C67 -0.27346735842076 A64 -L89 -0.277177376865597 F61 -A90 -0.278644346408527 I60 -I66 -0.281136973431051 C69 -K75 -0.287248184652283 I66 -L72 -0.287543440974101 L87 -D93 -0.28795320268313 S65 -L72 -0.288175582162174 S65 -F70 -0.289445756164945 A90 -C95 -0.296699589524732 F70 -I86 -0.306522759700053 I57 -N63 -0.316214806269782 N63 -S97 -0.324267217436441 S65 -V91 -0.324408586780696 Y68 -Y88 -0.325808150382622 S82 -L87 -0.327227335640708 H74 -V84 -0.335089255596314 C69 -Y88 -0.335939213139367 L54 -I60 -0.336579274722688 V55 -F61 -0.345239675124545 I86 -V92 -0.349777556827013 G71 -L87 -0.353128157748806 V91 -A96 -0.361233636655946 V81 -I86 -0.367572217183476 G59 -A96 -0.374730381171998 Y68 -V91 -0.379035958044906 C67 -D93 -0.385944802766583 C67 -E83 -0.395653434287566 C67 -V84 -0.415950204644483 V92 -I98 -0.422953987143942 I60 -A90 -0.463945075423468 N63 -Y88 -0.470992800116261 S65 -A90 -0.541870717067225 C67 -F94 -0.557601851029329