[Fri Aug 26 17:23:42 2016] >Input file: TMA0A083VQR5M1D.pdb >TM segments: 144-192 MAIDEN score = 53.3037 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S152 -W166 10 S153 -Q167 10 S153 -W166 10 R151 -W166 10 S152 -C165 10 W159 -C165 1.8155687155284 R151 -C165 1.17026429974431 E160 -C165 1.0754376219736 Y158 -C165 1.0464752127327 S153 -C165 1.0367780766037 A149 -W166 0.878916783688458 W166 -L174 0.820776888730702 A154 -W166 0.746055697747288 A154 -Q167 0.7242508993162 R151 -A177 0.719038003091248 A150 -W166 0.634790223582777 W159 -V164 0.622464660514636 L155 -Q167 0.597381489510001 S152 -L162 0.582623966576962 Y158 -V164 0.564168215972358 S153 -L168 0.557875246847175 Y158 -W166 0.532446068447487 A149 -L174 0.47735540034262 S152 -V164 0.471080069084212 A148 -V164 0.466762578023142 A150 -I176 0.458557266676926 R151 -V164 0.440882513769076 S153 -W159 0.43538875806472 S152 -Y158 0.396152040470595 S153 -H172 0.377065637184192 S152 -H172 0.373248949754213 L179 -Q184 0.358948406021856 A150 -C165 0.352348062211431 A157 -A163 0.34638221446846 A154 -L168 0.341934375281002 Q167 -H172 0.329694987688604 C165 -H172 0.315650318067409 A148 -G173 0.310526003670045 S152 -A177 0.310316046188064 S152 -W159 0.297891693267084 R151 -L168 0.295285690468232 W159 -W166 0.293284942913146 A150 -L174 0.293244515898755 Y158 -G173 0.289128026617195 A150 -A175 0.261591312051076 S153 -A163 0.257289948876606 L155 -W166 0.24184717662046 R151 -M180 0.239148456211507 A149 -Y158 0.238747246099979 R151 -A163 0.237188555614359 A154 -G173 0.235834165452571 G145 -A163 0.210945458029096 R181 -A188 0.202449157806757 R151 -D171 0.202055740992005 L168 -G173 0.194986954146161 R151 -H172 0.192938831712289 R151 -W159 0.171227465611201 R151 -L174 0.168580795108195 A154 -V164 0.161181564264558 S152 -L168 0.159734016239188 L147 -C165 0.155423721098371 R151 -Q167 0.154841071022683 L146 -C165 0.153760242651605 G145 -V164 0.151744790564488 A150 -R161 0.150385035796425 I176 -A182 0.149591336534566 A149 -D171 0.148560768881643 A149 -I176 0.148392564119829 S152 -S170 0.141637507503654 A154 -R161 0.140322771347175 A148 -R161 0.136442147417453 Q184 -R190 0.134446702559388 D171 -S178 0.1254572919704 A150 -R181 0.125135281797418 S153 -D171 0.124470447060548 R161 -Q167 0.120234074019018 L146 -L162 0.120055468836574 A149 -W159 0.116767134259686 L174 -A183 0.115844096882836 A157 -G169 0.115052557556213 S153 -L174 0.114998316089686 G173 -L179 0.113990806670932 A148 -R181 0.113954508916816 A149 -S170 0.113388515786742 L147 -A163 0.113100214327791 A175 -R181 0.11293795941503 A149 -G169 0.106689270158896 L155 -G173 0.106588900857213 A148 -L162 0.106412137118704 L155 -S170 0.105624032059778 G169 -A177 0.104656566592972 R181 -V187 0.104189509806813 C165 -S170 0.103562755884256 A144 -L162 0.103439483020845 A150 -G169 0.102293925154173 R151 -L162 0.100446098250787 R185 -R190 0.0999291547887343 A149 -S178 0.0988914514653478 S170 -A177 0.0988380601872589 R151 -S178 0.0964934226412451 S152 -A175 0.0945253852241286 A144 -V164 0.0918280517690233 A175 -A182 0.0914297010504699 S170 -S178 0.0873321783283627 R151 -P156 0.0870836891543787 S153 -L162 0.084766995621532 L147 -R161 0.0844596710037286 A154 -H172 0.0823302449690351 A177 -Q184 0.0808872440573689 A149 -A175 0.0785630001926947 S178 -R185 0.0763318574760178 L146 -L174 0.0758887602002041 A154 -S170 0.0751412650719425 L146 -R161 0.0716104690304242 A148 -S178 0.0712442058633451 A150 -A183 0.0705052759034714 L155 -E160 0.0686158654462556 R151 -L179 0.0667838397153855 A157 -L168 0.0661488687315513 A150 -A163 0.0644828415570995 L179 -V187 0.0618974371242729 L162 -L168 0.0615827649080325 S152 -D171 0.0583207595420852 A149 -A157 0.0574320299946276 A149 -L168 0.0550479854837813 S178 -D186 0.0545522115744135 L147 -A177 0.0534588497700001 S170 -I176 0.0528015794781039 S153 -I176 0.0523740483387629 L147 -M180 0.0489289807317994 A149 -L155 0.0440189942113403 P156 -V164 0.0429340694142155 A149 -H172 0.0349412588658571 L155 -V164 0.0344631111243725 W159 -G173 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