[Mon Aug 29 17:38:11 2016] >Input file: TMA0A094UQB3M1G.pdb >TM segments: 96-112_ 131-147 MAIDEN score = -7.0224 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F138 -L143 0.551052160092955 V112 -M131 0.355024672689851 H105 -H137 0.351439872698009 E133 -G140 0.343762944827993 H100 -H137 0.321103214345086 E133 -F138 0.32069223222054 F106 -E144 0.302092090094352 N104 -E133 0.269517558052391 H137 -L143 0.261043430841175 L109 -E144 0.256498739651629 W101 -H137 0.230382821142483 V107 -H137 0.186121504955262 E133 -A142 0.183009492170688 N104 -G140 0.180259071350186 I98 -G140 0.168169661277782 V107 -F138 0.165595762630007 H132 -T139 0.159947964518833 V107 -E144 0.132156980959687 V112 -H132 0.127397522777618 N104 -I141 0.126143300833161 V108 -S135 0.124811177223246 V108 -F138 0.11705165682193 Q136 -E144 0.116636291999974 H137 -A142 0.107987419967438 I98 -I141 0.100294239860539 V110 -S135 0.0976483411002187 V107 -L134 0.0976421065774549 L134 -L145 0.0921895333522307 V110 -L143 0.0901441944642147 L99 -A142 0.0898160216315842 H105 -G140 0.0897863237120591 L103 -F138 0.0892140111413329 V108 -H137 0.0864734407279295 F106 -G140 0.0822923588084632 V108 -W146 0.0791974776029307 Q136 -I141 0.0785116623830202 V108 -I141 0.0759069602239348 S97 -G140 0.0725515458794712 H132 -A142 0.0705502135326164 I98 -L103 0.0687462003480879 V107 -I141 0.0685538153633383 V110 -E144 0.0643004032099936 H105 -E133 0.0641100732526074 V110 -L134 0.0626094282132987 A111 -L134 0.0624263797506179 L109 -I141 0.0594028016759047 S135 -E144 0.0547455166984991 H100 -F106 0.0485305437484851 V107 -V112 0.0475372120931707 L99 -G140 0.0460539419300678 W101 -G140 0.0454713445259882 L109 -H137 0.0441290464576302 H100 -A142 0.0440652595481567 H132 -G140 0.0428321990469308 L99 -I141 0.0421552631904376 H132 -I141 0.0409476584896519 V108 -E144 0.0386204312361631 Q136 -L143 0.0374466657243575 S135 -I141 0.036412962933781 V110 -F138 0.0358131222439166 W101 -F138 0.0332140627304687 A111 -L145 0.0329143117551006 V112 -E133 0.0279970785810658 V108 -L145 0.0275783992336809 V110 -A142 0.0266132434338591 S135 -L143 0.0265118220883521 A111 -S135 0.0248068242981727 V108 -L143 0.024593110482801 H105 -A142 0.0239975110987167 V108 -M131 0.0223474033863136 V107 -G140 0.0203011455036441 L103 -G140 0.0169601353611126 L109 -H132 0.0120117170299345 L99 -H137 0.0117251642579563 H105 -L143 0.0104804227876493 H105 -L134 0.0100244403275163 L109 -T139 0.0059145743603608 V112 -Q136 0.00531377472225381 F138 -E144 0.000466824569189228 N104 -T139 -0.00114170041613182 F106 -F138 -0.00338876431976765 L99 -F138 -0.0105350029167059 N104 -A142 -0.010549015673555 F106 -S135 -0.0105926161999035 F138 -W146 -0.0129125717940917 F106 -L134 -0.0175194802955732 M131 -T139 -0.0203330841200625 L134 -E144 -0.0228119920747689 A111 -P147 -0.0317096965609966 H132 -H137 -0.0368420164197358 L109 -E133 -0.040294939115268 T139 -W146 -0.0472830315288989 V107 -L145 -0.0509018814375635 V110 -P147 -0.0512801773835223 A111 -E144 -0.0565522359699404 S97 -I141 -0.0566446401129412 V112 -P147 -0.0582274114529691 I98 -N104 -0.0594911668286091 L109 -Q136 -0.0600463424461708 V112 -E144 -0.0611131031628505 S135 -L145 -0.0616771191755543 V110 -M131 -0.0623153094104651 E133 -I141 -0.0642244554425586 A111 -W146 -0.0670579378008611 V107 -M131 -0.0684960642526207 V108 -P147 -0.071433387401008 A111 -E133 -0.0733313794618558 T139 -L145 -0.0784210885304355 F106 -H137 -0.0786994284981573 L99 -T139 -0.0815970463433113 D102 -I141 -0.0853053197786351 F106 -E133 -0.0855653505441802 V110 -W146 -0.0910084630133567 L109 -P147 -0.0938283539367903 V110 -E133 -0.0938767483512919 V108 -L134 -0.0946896585914363 V107 -S135 -0.0949997945835208 W101 -A142 -0.101373454419024 H105 -F138 -0.101817015144148 N104 -H137 -0.104841995647027 V107 -T139 -0.10559091863255 H105 -T139 -0.1135516541568 N104 -L143 -0.118360907645704 N104 -F138 -0.122326717737539 N104 -L134 -0.123382910152423 V112 -F138 -0.125518809177815 F106 -T139 -0.130461526076703 H100 -T139 -0.130927524103569 S135 -W146 -0.134649711742755 H100 -G140 -0.139848846147181 V112 -W146 -0.140440319768538 V110 -L145 -0.142610259661678 L103 -I141 -0.143337153694817 M131 -F138 -0.147776588388167 S135 -G140 -0.148062365683864 V107 -E133 -0.148136245416203 V108 -T139 -0.148620914129759 I98 -A142 -0.150253907091233 L99 -N104 -0.1508709359342 H137 -E144 -0.151579296948688 A111 -H132 -0.153406098435947 F138 -L145 -0.160337759559358 A111 -F138 -0.160722913483613 L103 -A142 -0.162035061215609 L134 -I141 -0.166276298535188 L103 -H137 -0.168812559306253 F106 -L143 -0.174954250993363 L134 -G140 -0.175985680035689 F106 -I141 -0.186862824999015 M131 -H137 -0.187219561464559 L109 -L145 -0.187673142588825 L109 -L143 -0.187972486940985 T139 -E144 -0.188073461947964 L109 -S135 -0.189305080099088 V108 -E133 -0.189708600502987 E133 -T139 -0.190793487401973 S135 -A142 -0.193174122313648 L134 -A142 -0.194027934443397 Q136 -A142 -0.198059719579997 H100 -F138 -0.20018035672786 F106 -A142 -0.201032276006334 A111 -M131 -0.205529779969272 L134 -L143 -0.211733235908738 W101 -F106 -0.212197779531233 V107 -L143 -0.221132126108391 L134 -T139 -0.226327061303434 H100 -I141 -0.227124863001516 L99 -H105 -0.251636318983487 L109 -A142 -0.262278462747831 L109 -W146 -0.271686511299891 L109 -F138 -0.273440289902546 V112 -S135 -0.285035425255956 L109 -M131 -0.302117054328253 V112 -L134 -0.310571377115537 W101 -I141 -0.332442289197455 V108 -A142 -0.335186347262005 H132 -F138 -0.338040808974263 V107 -A142 -0.367607075720068 M131 -Q136 -0.378123536471345 L109 -L134 -0.410261318070367 H100 -H105 -0.42210303717123 H105 -I141 -0.439000554345737