[Mon Aug 29 17:38:49 2016] >Input file: TMA0A095H331M1G.pdb >TM segments: 528-540_ 551-557_ 572-598 MAIDEN score = 1.0481 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I580 -V593 2.14119649834892 I581 -E589 1.19361643516942 I581 -V593 0.924800212944504 I580 -V594 0.802639413433779 D584 -E589 0.670044476103052 I581 -G591 0.604717287196758 M534 -A598 0.587513965042248 M534 -F539 0.585698720756034 F582 -G591 0.571354062911734 F582 -I590 0.53501648122915 E533 -P577 0.488308127212254 E535 -P578 0.465869949558602 K532 -Q597 0.447781848690858 T538 -Q597 0.423153392275984 S530 -G595 0.391523019110394 C531 -P578 0.384951794869716 C528 -P577 0.379186912780641 C528 -P578 0.376184030454219 C528 -G595 0.356790491702967 C531 -T540 0.355158648878376 H552 -D584 0.353601096749173 G576 -Y596 0.350804386140471 G579 -V594 0.349207935782499 F583 -I590 0.344795237800587 C531 -Y596 0.33774344636892 M534 -V554 0.333317976336314 F582 -R592 0.331504776259944 M534 -Y596 0.326416921895477 L574 -G579 0.323870996400887 L537 -A598 0.319084181971483 C528 -H536 0.316912998457669 M534 -D557 0.301952490847139 M534 -Q597 0.295181565665413 E533 -Y596 0.294017427103119 S530 -G576 0.286612438959762 H552 -H586 0.283008143411613 P578 -V593 0.276421592648304 M534 -R555 0.265994196204315 G579 -R592 0.25644898045187 D584 -G591 0.24996127607877 K532 -P578 0.246665400737052 T540 -Q597 0.244142819825473 I581 -R592 0.238407865800116 P577 -V594 0.229014711722136 C531 -P577 0.223688995281714 C528 -E533 0.211363451865939 V554 -D584 0.21072109041232 L574 -V594 0.208671189123416 C528 -F575 0.201922422740122 K532 -P577 0.19658925631921 I581 -G587 0.196120380737005 K532 -D557 0.193436367267581 A556 -F572 0.193200417285216 R555 -I581 0.190214647707737 A556 -I581 0.185294596398628 P578 -G591 0.182876137155102 N573 -R592 0.178390913690514 T538 -P578 0.176611187486717 S530 -V593 0.173061945480206 K532 -L537 0.172063072581384 M534 -T540 0.167823916690915 N573 -P578 0.164989249164646 P577 -Q597 0.159648765509966 E535 -Q597 0.159081714287197 H536 -Y596 0.158094964960404 F582 -N588 0.156928405985709 H552 -G587 0.142265889890688 E535 -I580 0.139174255405905 V554 -V593 0.136883786196035 K532 -G595 0.136507347404696 R555 -F583 0.134899449717412 C531 -Q597 0.132964277906135 I580 -I590 0.130290456660571 R555 -I580 0.128299941067345 F575 -G595 0.128071282229711 G579 -E589 0.127013931174964 E533 -T538 0.126235596799324 L551 -R585 0.126059139160516 A556 -P577 0.125930323768005 I581 -Y596 0.125544219711913 T538 -G595 0.123808580211461 E533 -G579 0.123514153612677 R555 -F572 0.122550284597991 V529 -V593 0.121982192355531 G576 -V593 0.121089151395321 G579 -I590 0.120781643213211 E533 -A598 0.120357688381449 R555 -P578 0.120078862820883 F539 -R555 0.113998948601141 V554 -G587 0.113993212666824 E535 -G595 0.11293422420697 A556 -G576 0.110467424742141 N573 -G591 0.108877423552967 C528 -G579 0.10605437599506 E535 -T540 0.105878435823945 N573 -N588 0.103137527703218 P577 -R592 0.102053824702333 A556 -P578 0.0995575561450122 L553 -D584 0.0952782220819743 K532 -G579 0.0945538773924246 S530 -I580 0.0925466699893587 L574 -F583 0.0873229650267113 D557 -P578 0.0845792349152306 H552 -I581 0.0844013958859789 V529 -V594 0.084311140254222 C528 -R555 0.0824465862914288 K532 -T540 0.0822265815653074 R555 -P577 0.0820727372218468 G591 -Q597 0.0808344068001501 V529 -P577 0.0772065275539082 L537 -P578 0.0746690054816452 F575 -Y596 0.0744341087006717 C528 -A556 0.0733724917688057 S530 -T540 0.0732772041563614 F582 -Q597 0.0716321260914228 D557 -F572 0.0707678262713984 N573 -G579 0.0704879719592884 L537 -Q597 0.0684757421138724 L574 -I590 0.0656749450433132 R592 -A598 0.0632881862064799 F575 -V593 0.0630037662348508 A556 -F583 0.0623932975390149 E535 -G579 0.0617422716544476 E533 -P578 0.0614061016107019 R585 -I590 0.0612547759933113 F539 -P578 0.0607064705270345 L553 -R585 0.0596418458417256 A556 -F582 0.0596292535791305 V529 -Q597 0.0594345123293598 F572 -F582 0.0571193035608903 E535 -R555 0.0563534014650795 F539 -Y596 0.0561834515225339 L574 -E589 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