[Mon Aug 29 17:40:29 2016] >Input file: TMA0A0A0MR82M1G.pdb >TM segments: 287-296_ 309-321_ 327-332 MAIDEN score = 0.5454 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I311 -R331 0.735287543400341 F314 -L327 0.598381540557094 V309 -V332 0.597706405442286 I311 -V332 0.570294036771528 F287 -Q293 0.498502769795635 F287 -R292 0.492905723591871 T312 -L327 0.427262825720121 G313 -E329 0.361368546801657 C295 -H310 0.289686343049812 G313 -Y318 0.257396595921449 F314 -G321 0.244141099475182 F314 -R328 0.230676663475579 Y318 -R328 0.17984438241072 I294 -I311 0.158422380872539 I311 -A330 0.142297347498556 F314 -A330 0.14050491854106 I294 -T312 0.13165701565991 G315 -R328 0.129353262822975 I291 -L327 0.104514188848738 I311 -A316 0.104348280061686 G313 -V332 0.102045942797162 G315 -A330 0.0912953253373292 F314 -E329 0.089200870089031 F287 -C295 0.0741224713063549 I311 -L317 0.0729728170129702 I311 -R328 0.066129833631138 G313 -Y319 0.0659298950586642 T312 -Y318 0.0533531405157444 L317 -A330 0.0501141613366951 I294 -H310 0.0498542546003898 H310 -R331 0.0487828376958515 A316 -E329 0.0469132231624227 A316 -A330 0.0467471706783571 Q293 -T312 0.0406574239960741 I291 -T312 0.0303507125856814 L317 -E329 0.0272232858454906 G313 -G321 0.0192836301646642 L296 -V309 0.0175993893046558 H310 -G315 0.0161211628535564 H310 -L327 0.0116927914134467 C295 -V309 0.00641416079506296 H310 -V332 0.00420416597829476 I311 -E329 0.00191069399724758 F287 -I294 0.00108126745587178 L317 -L327 -0.00389809930965068 G313 -R331 -0.0176590397354794 T312 -A330 -0.0361184238952643 S288 -Q293 -0.0509723457910418 L317 -R331 -0.0628966334519478 F314 -Y319 -0.0652761878468655 F314 -G320 -0.0669233787937218 D290 -L327 -0.0692956601557406 S288 -I294 -0.0699640536554682 Y318 -A330 -0.0770370687380928 L317 -R328 -0.0869202776005764 T312 -E329 -0.0985081656252893 H310 -E329 -0.102513684654979 G321 -R328 -0.103355608880453 T312 -L317 -0.111238621411928 G313 -A330 -0.114117167749347 Y318 -E329 -0.116897859256273 I294 -V309 -0.124914503418189 Y318 -L327 -0.143856347983913 D289 -I294 -0.148885973414594 A316 -L327 -0.162542352868488 H310 -R328 -0.166530330600094 V309 -R328 -0.167908030903982 A316 -R328 -0.170482116281883 T312 -R331 -0.173561787300274 G315 -G320 -0.176364259103207 G313 -R328 -0.190001022174106 D289 -C295 -0.193563291291971 G315 -E329 -0.207092321742765 A316 -G321 -0.209953334834459 I311 -L327 -0.2123192377793 G313 -L327 -0.212924170053413 T312 -V332 -0.252759952763865 H310 -A330 -0.270776713231841 G315 -G321 -0.284107744188108 G315 -L327 -0.289772032723828 V309 -E329 -0.328050250006149 V309 -A330 -0.356229698496618 T312 -R328 -0.489671040299385 V309 -R331 -0.697263869183113