[Mon Aug 29 17:53:46 2016] >Input file: TMA0A0C4DFP8M1G.pdb >TM segments: 117-128 MAIDEN score = -0.9728 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C117 -G122 0.677384824335993 C119 -I124 0.200944813889571 H118 -I124 0.179115417902335 C117 -L125 0.160211310500292 I121 -V126 -0.0397589162927261 C117 -V126 -0.12968786322278 P120 -L125 -0.147905263859802 H118 -L125 -0.193401282149371 C117 -H123 -0.196037137156838 C117 -I124 -0.718920572822768 H118 -H123 -0.764737498730243