[Mon Aug 29 16:45:23 2016] >Input file: TMA0A0D6MBY0M2G.pdb >TM segments: 90-111 MAIDEN score = -8.3098 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W103 -L108 0.477569957981377 R93 -V98 0.441020157199026 M90 -C95 0.28551629632242 V99 -L104 0.252433632122715 V98 -L104 0.185363708600306 V98 -W103 0.154553207602143 M92 -L97 0.119415256053443 V98 -S106 0.119014948950346 I102 -L107 0.118442822198095 L104 -V110 0.112468131369756 L101 -L108 0.109293686847912 S91 -V99 0.104376575116828 L97 -L107 0.0953735326180132 V98 -L107 0.0888480823599977 M92 -T100 0.0834415005888428 I102 -M111 0.0609402469024154 C95 -L104 0.0412532938223595 M90 -V98 0.0347183354108904 I96 -L105 0.0327319419945216 R93 -L101 0.0214704168092039 L97 -I102 0.014103915033755 L104 -M111 0.0120212995108151 I102 -V110 0.00279235452187176 T94 -L104 -6.95606944034477e-05 T100 -L109 -0.000922959639632515 S91 -T100 -0.0120615922248617 C95 -W103 -0.0168269525062266 M92 -L101 -0.0235884370320205 V99 -L107 -0.0346585900684406 M90 -V99 -0.0377984277426666 T94 -W103 -0.0581672990777328 L105 -M111 -0.065110252587969 R93 -W103 -0.0776202994124464 L97 -L105 -0.0857518687758176 T100 -L108 -0.0915040597291021 L97 -W103 -0.10322781618917 V99 -L108 -0.104868270007754 I96 -L104 -0.107260182841426 L97 -S106 -0.125532344279451 T94 -I102 -0.137431195369204 I102 -L109 -0.141076297507121 R93 -T100 -0.14194116052934 L101 -L109 -0.144748392139068 R93 -I102 -0.156361988254938 R93 -V99 -0.164128596350232 W103 -M111 -0.173873373568882 S106 -M111 -0.191600814621883 C95 -I102 -0.198672008536306 T100 -L105 -0.205481975407627 S91 -I96 -0.206580936138982 L105 -V110 -0.207626528693392 I102 -L108 -0.213812412352812 T94 -L101 -0.221030678957086 M92 -V99 -0.228024703996664 T100 -S106 -0.237518954496292 T94 -V99 -0.239715727718908 L97 -L104 -0.244284468457264 V98 -L105 -0.246109203687239 T100 -L107 -0.261599672877595 M92 -V98 -0.282451434576568 M90 -L97 -0.300547883884868 C95 -T100 -0.30798082455702 W103 -V110 -0.310107266492717 S91 -L97 -0.31414230397919 V99 -S106 -0.325087505133594 I96 -W103 -0.329435595156802 W103 -L109 -0.33402056699673 S91 -V98 -0.335001070657319 I96 -I102 -0.337025692904107 L101 -S106 -0.355920164537593 M90 -I96 -0.362240531248749 T94 -T100 -0.377966316304527 I96 -L101 -0.382209530975641 L101 -L107 -0.384496186798863 V99 -L105 -0.395541797654264 C95 -L101 -0.466756345470409 L104 -L109 -0.469439270766712