[Mon Aug 29 17:01:06 2016] >Input file: TMA0A0E4BA27M1G.pdb >TM segments: 132-144_ 149-158_ 163-172_ 177-200 MAIDEN score = 9.3473 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V156 -L163 1.61651626926255 A143 -V169 1.54682578571323 P149 -V169 1.44208750176959 P170 -V180 1.43409201111116 P154 -V165 1.27705612903326 I171 -L177 1.19726557410846 A136 -K141 1.07682139734317 F167 -V185 0.981437650019667 W139 -F167 0.875609638915236 P138 -P153 0.762500689370644 V151 -F167 0.735301966331553 Q142 -V150 0.729986419578527 A143 -P149 0.71197456531219 W139 -A182 0.667327159050909 P170 -K178 0.662008757770513 L163 -M187 0.626724919279072 F167 -S183 0.618547898785358 V150 -F167 0.611378220545491 A143 -V181 0.60753570643555 Y140 -V181 0.604482589752289 Y140 -A182 0.576235335867891 Y140 -A168 0.570075309485637 W139 -V180 0.535265639867303 I171 -V180 0.532847586459196 P149 -F167 0.514832038563932 I171 -V181 0.496236886008663 V165 -V185 0.495315708206644 W139 -V181 0.485970632698876 Y140 -V169 0.483185411888599 V169 -V181 0.482216052557531 V156 -V164 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P170 -V181 0.249029663568853 Y132 -R137 0.248018473769173 S157 -A182 0.247882411100239 L172 -G179 0.24262809985312 Q142 -P170 0.239257873465377 T152 -L163 0.237675172402015 Q142 -V151 0.22602421050817 Q142 -P154 0.214140776710852 P134 -Q142 0.213512222581408 A136 -S157 0.213337734646741 F167 -A182 0.211811661517491 P170 -S183 0.207453338189117 Y132 -P138 0.202413809001706 A168 -D184 0.194313253774391 V169 -A182 0.192859135048483 T135 -A158 0.187695195760716 K141 -D184 0.186363915758493 A144 -G179 0.184453326114418 R137 -Q142 0.184215191559709 P154 -V164 0.180171218009212 P138 -T152 0.178558655177178 W139 -V169 0.176935924418906 N193 -H198 0.174323678715961 R137 -P170 0.172658137043908 P153 -S186 0.171189261979527 P134 -T166 0.169572049940264 Q142 -V169 0.166508420164524 K141 -F167 0.166114617847696 A136 -V181 0.165313226077863 Y140 -S157 0.16526232499863 T135 -T166 0.161487014521717 T135 -T152 0.154983559613287 D133 -W139 0.154738982162066 P154 -D188 0.152583855489581 V156 -D188 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