[Mon Aug 29 17:02:55 2016] >Input file: TMA0A0E8TRA3M1G.pdb >TM segments: 255-274 MAIDEN score = -3.0805 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R264 -V269 0.562979371841236 D266 -F271 0.510519445066421 V260 -R265 0.438025724952867 E258 -R264 0.285141782669869 D266 -G272 0.268809627822312 G263 -A270 0.157465380905485 M255 -V260 0.155121467688595 V260 -G268 0.136225981632206 D266 -W273 0.121994764408873 S261 -V269 0.120056258980747 R265 -W273 0.112592847136819 G263 -F271 0.112362946786382 V269 -S274 0.10430001791975 E258 -D266 0.102062097621347 L262 -A270 0.0883173110639595 M255 -R264 0.079118850407788 Q256 -R265 0.0775848934422125 S261 -A270 0.0704904602783554 S259 -R264 0.0679109673485296 D266 -S274 0.0528336711686337 M255 -G263 0.0382520007447962 S259 -L267 0.0274194484980935 G263 -G272 0.0141993742728481 R264 -G272 0.01353775675026 E258 -R265 0.00282280849177674 R265 -G272 -0.00580024247472899 V260 -V269 -0.00607895793368973 S259 -G268 -0.0139153561460781 Q256 -G263 -0.0148059996802894 S261 -F271 -0.0174782860153394 S259 -D266 -0.0188842988131388 R265 -A270 -0.0215637599320988 E258 -G268 -0.0222799665214115 G263 -G268 -0.0350212527028315 S261 -D266 -0.0457602680485284 S259 -R265 -0.0603164011385451 R265 -S274 -0.0690936988919828 Q256 -R264 -0.069513403417261 R265 -F271 -0.0923595707634455 G268 -S274 -0.0997805829463995 G268 -W273 -0.100948651394173 R264 -S274 -0.108866922111119 L257 -L262 -0.120024893718264 L262 -F271 -0.129579683842235 L257 -G263 -0.130934715708895 Q256 -S261 -0.133743005676927 S261 -G268 -0.143161438731655 L257 -R265 -0.15080121831273 M255 -S261 -0.163808719400794 E258 -L267 -0.16555914409041 R264 -A270 -0.1704474839542 L267 -S274 -0.17131235612537 L257 -D266 -0.180610279330646 R264 -W273 -0.184352996689327 L257 -R264 -0.185750679813188 L262 -G268 -0.190128809423223 R264 -F271 -0.191838681942169 G263 -V269 -0.207715796531781 Q256 -L262 -0.23980663540629 S261 -L267 -0.253615152883899 L262 -V269 -0.254177890867075 E258 -G263 -0.271612162541004 V260 -L267 -0.285000542644586 V260 -D266 -0.29988778330999 M255 -R265 -0.321292121978858 L267 -W273 -0.33933131377024 L267 -G272 -0.351464843799926 M255 -L262 -0.351588061589768 L262 -L267 -0.410582009694831