[Mon Aug 29 17:10:47 2016] >Input file: TMA0A0G2JNI0M1G.pdb >TM segments: 205-234_ 278-287_ 328-338 MAIDEN score = 11.0705 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A231 -I278 2.35488918143144 T225 -V287 1.32102925270079 A230 -I278 1.31793076886477 W205 -I222 1.22979354309919 T225 -P286 1.1828281760692 I222 -L227 1.11190907129469 W205 -L221 1.04963648282784 W226 -V287 0.915522415049207 L221 -W226 0.821261734607283 W226 -L283 0.785339678997459 R216 -C233 0.692957614648269 L227 -L280 0.682533963369891 L209 -A219 0.67425922181872 L209 -C217 0.660713136310122 G218 -S229 0.656202734212732 I222 -V228 0.652771896153375 V228 -L280 0.633582569861697 W226 -E282 0.624944078524776 T220 -L227 0.606677649597996 L209 -H215 0.604899122851215 V228 -I278 0.573100128885037 E282 -V287 0.534554379270336 L221 -L227 0.528566720947783 L227 -A281 0.518293113697948 W226 -L280 0.483492717467491 L221 -V228 0.460935572994506 T220 -V228 0.45507506624255 L221 -V287 0.407051556240237 S229 -L280 0.382314074687391 S208 -R216 0.379920950598065 A207 -L227 0.372330394491938 L227 -V287 0.358495475473951 A207 -L221 0.356771937056654 T220 -E282 0.343923809017272 T225 -S285 0.336814917861295 A219 -S229 0.335901792380465 S229 -A281 0.334338204298677 S214 -H328 0.332904798345126 C233 -E282 0.331957126246708 A207 -A281 0.316961346028618 G213 -G218 0.311380181048685 C217 -H328 0.310007901174495 W205 -T220 0.306976410614976 C217 -C233 0.303027289056974 L227 -L283 0.297677916768573 A231 -L280 0.291677430161614 A230 -L280 0.272415406568414 F234 -E282 0.272296544901652 A219 -A230 0.259601248348758 R216 -A230 0.256271541207679 L209 -S229 0.256100446889563 L209 -S214 0.253844499252404 G218 -A231 0.244524108032056 A207 -A219 0.241548117361915 V228 -E282 0.228506113385908 S208 -S279 0.225287525015865 L221 -P286 0.223057703519576 W205 -H328 0.217471639845861 V228 -F234 0.21027225245917 L221 -S229 0.20931390999489 A231 -S279 0.208980337500767 A207 -S214 0.202342570130695 T220 -C233 0.196215133559139 A224 -S284 0.195284893678621 A207 -G213 0.192603512726571 G218 -S279 0.192188763796432 Q206 -C217 0.184202217518846 C217 -L227 0.183282189359725 A224 -A281 0.181133049812409 W205 -T225 0.18035392204091 S229 -L283 0.175179176898729 G218 -H328 0.173883897655204 L209 -S279 0.171204062557615 W205 -A219 0.170374215215052 S208 -C217 0.170193519372723 G218 -H232 0.169943849626371 H232 -L280 0.169763011700529 Q206 -L221 0.167013804280007 G218 -Q331 0.163211311922201 A219 -T225 0.162052455319597 T220 -S229 0.161075848298641 Q210 -C233 0.160182361683223 W205 -L227 0.15809014403141 T220 -A231 0.151816782138432 T225 -E282 0.149138243276592 Q206 -R216 0.143767655981463 Q210 -A281 0.140579313668245 W205 -S229 0.130621318075651 S214 -C233 0.130049623142507 C217 -F234 0.129528840940788 S208 -C233 0.125597717476187 H232 -A281 0.125358858682511 W211 -L283 0.118647524071633 L227 -S284 0.115404953139273 W211 -C233 0.113545951909464 S208 -A231 0.113228939708129 Q206 -L227 0.109838348953001 C217 -I278 0.108928458710168 T225 -L283 0.108752331951274 L221 -I278 0.107468197590899 R216 -A231 0.107214849436655 A207 -R330 0.103748304627026 G218 -V228 0.10246295885763 G218 -A281 0.100927822968021 R216 -S229 0.100195053704766 T225 -S284 0.0999006990749902 A219 -E282 0.0988889331688005 C217 -R330 0.0968400820783932 A207 -T220 0.0934458258533013 L209 -L329 0.0932292894070557 N223 -P286 0.0929540949055117 L209 -G218 0.0907546491801856 A207 -R216 0.0903600758016712 L221 -A230 0.0903566112276295 C233 -A281 0.0901518101218612 S229 -E282 0.0857022845294422 Q206 -L329 0.0841762195426297 V228 -A281 0.0837936982616858 Q206 -R330 0.0835144761476836 T225 -S279 0.0834892023689318 A224 -P286 0.0827178910770701 Q206 -L280 0.0818098257009976 Q206 -G218 0.0788901868258884 A219 -L227 0.0788757953811414 G213 -H328 0.0767014952618652 Q210 -L227 0.0766458727665489 A207 -N223 0.0742482596123546 A207 -I278 0.0731304147401808 W205 -G218 0.0722061807828558 S229 -I278 0.0681579560966661 H215 -S229 0.067616352657814 G213 -A219 0.0669483435216045 A207 -A224 0.0656519012832342 C217 -S229 0.0652379945171098 L221 -E282 0.0637662440189644 A219 -F234 0.0632222796333366 A207 -A231 0.0625981105129283 G218 -F234 0.0620598041810307 A224 -L280 0.0605352980701905 Q206 -H215 0.0603866109155353 W211 -S285 0.0574744647718095 N223 -A281 0.0568952915564116 S208 -S229 0.0562490300899596 L209 -E282 0.0558396397386742 Q210 -S229 0.0547851759096059 G218 -I278 0.0543110399057468 A219 -L283 0.0526334055328475 G218 -V287 0.0514013430710564 Q210 -A219 0.0511467880377285 I222 -I278 0.0510224778664119 W211 -C217 0.0462498487042118 H215 -F234 0.0444600640281747 W226 -F234 0.0427843153492136 C217 -A231 0.0425564294881351 N223 -S285 0.042504545402406 W226 -A281 0.0419992050711113 A207 -A230 0.0405658602018439 R216 -A281 0.0396554203712034 L209 -I222 0.0379839587944595 H215 -L329 0.0364268326624294 S208 -V287 0.0361523404242458 L209 -L221 0.0340974235059832 Q206 -I222 0.0320320711180129 C217 -L280 0.0314191472511771 A219 -H232 0.0308018736818889 Q206 -S279 0.0296306500965913 L227 -S285 0.0296244132430046 S208 -Q331 0.0280225341493701 Q206 -G213 0.026980705884589 L221 -S279 0.0268903519827095 W211 -L227 0.0234798221846972 L209 -I278 0.0216619232708339 S208 -A281 0.0209621307501853 L227 -C233 0.0205953863176944 A281 -P286 0.0204243257062906 A207 -L280 0.0187340141363084 L209 -H232 0.0170803508818608 T220 -R330 0.0168147983583715 A219 -V287 0.0165559007901477 S208 -F234 0.0153243168642414 L209 -H328 0.014678405277198 G218 -L280 0.0140188215811636 S208 -W226 0.0136004949557602 S208 -A230 0.0120562185072814 A207 -C233 0.00991390982482088 L209 -A231 0.00883337790100391 Q206 -T225 0.00610521673611153 L209 -W226 0.00539139293760016 L209 -T225 0.00528873530738916 L209 -V287 0.00498108644346118 S208 -T225 0.00441522138804906 A207 -V228 0.00436330752200487 Q210 -A231 0.00374401415162273 G218 -E282 0.00222001940292049 C217 -S279 0.00172893167289212 Q206 -N223 0.00157290227882984 Q206 -A230 0.0013219948570109 S208 -A219 0.000804435344162968 G213 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A224 -E282 -0.10843113054594 I222 -A230 -0.108627815041934 F234 -L283 -0.110957837666067 W205 -A281 -0.111827018498752 S208 -I222 -0.112522417597838 R216 -L227 -0.1128290299606 T220 -H328 -0.113033094982178 R216 -L329 -0.113295613450821 C233 -S279 -0.113557625868694 Q206 -Q331 -0.114421807420944 W226 -S284 -0.115094010144088 L227 -H232 -0.116443252964478 N223 -L283 -0.116517942180034 L280 -P286 -0.116564386240484 N223 -E282 -0.117933444949937 W211 -A281 -0.119328881074082 V228 -C233 -0.121530845247536 D212 -C217 -0.123791500759557 G218 -W226 -0.125448059638189 W205 -C217 -0.127174288963483 I222 -V287 -0.130512336407811 H215 -T220 -0.131174172133446 T220 -T225 -0.131568205061797 C217 -V228 -0.132968684722031 W211 -A219 -0.134484572852199 S208 -H215 -0.136977314216344 Q206 -C233 -0.141380372126284 W226 -I278 -0.145189938280591 A219 -S279 -0.150561931456434 I222 -S229 -0.150737035615635 W205 -R330 -0.151348592501604 N223 -V228 -0.151729848860162 I222 -E282 -0.158765515509572 T220 -I278 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