[Mon Aug 29 17:18:21 2016] >Input file: TMA0A0H2UHK6M1G.pdb >TM segments: 253-286 MAIDEN score = -5.4151 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A271 -P277 0.400110728671911 A271 -M279 0.33898597522932 I257 -V265 0.304589407800795 T255 -L267 0.296628653053337 G270 -E278 0.288067656180096 G270 -G276 0.281363626725427 R268 -M279 0.216087438219047 V254 -L267 0.183732251549954 T255 -A284 0.180837031011501 R268 -S280 0.153714063701578 G270 -S280 0.151034016493787 T255 -T264 0.148899407558438 A271 -E278 0.148339992738874 G270 -W281 0.143208011197294 G253 -G270 0.139652762249636 G270 -P277 0.130735145584153 V254 -A284 0.12490111753877 T255 -C269 0.119087763620436 V254 -V265 0.113213845796348 T272 -S280 0.112686091503743 S280 -G286 0.11253829741912 S256 -L261 0.110955654517252 L267 -R282 0.0848856272773935 V254 -G270 0.0833297962226741 S256 -C269 0.0823808206746559 I257 -A284 0.0764158046545327 S256 -G262 0.0737349992305645 A271 -R282 0.0628336335511579 I257 -S263 0.0608235794396115 L267 -A284 0.0549631147862657 P260 -V265 0.0534617743296812 I258 -L267 0.0436977320850751 G253 -A284 0.0401372582534751 S280 -N285 0.0399120910895974 T255 -R283 0.0138565373786523 G253 -L266 0.012490503633825 G253 -N285 0.00875557845678099 R268 -W281 0.00560815993944042 S256 -R268 0.00358052868351688 I258 -L266 0.00049924572686777 C269 -A284 -0.00380498533849893 G270 -M279 -0.0055883076119434 G273 -S280 -0.010525999490715 L267 -R283 -0.0132786196578358 G253 -R282 -0.0162270449047703 L261 -L266 -0.0163056918149778 C269 -W281 -0.0170407787860825 S256 -T264 -0.0170574425437118 G253 -A271 -0.019473646167083 S256 -S263 -0.0236350313854046 T272 -E278 -0.0249403021185648 A271 -W281 -0.0261700796351034 T255 -L266 -0.0299746484679915 G273 -M279 -0.0328929661688413 T255 -S263 -0.0364125342015225 T255 -G270 -0.0441958783314351 T272 -W281 -0.0475592173105879 I274 -M279 -0.0519319242691925 T255 -R268 -0.0527293515935638 G253 -R283 -0.0637033571660313 G253 -R268 -0.0747720068430588 C269 -M279 -0.081338417891466 V254 -N285 -0.0825707300304219 L266 -R283 -0.0846840194402461 R268 -R283 -0.0911072425020499 R268 -R282 -0.0938034678166929 S256 -R283 -0.10303216127037 T272 -P277 -0.108428144409128 G253 -W281 -0.110890174291294 R268 -A284 -0.115127618323294 S256 -A284 -0.117981707991078 G270 -R282 -0.119884585020904 V254 -C269 -0.125889186799824 S256 -V265 -0.129663924262104 L267 -S280 -0.138906496949292 I258 -S263 -0.148130679817262 V254 -R268 -0.150821273452165 V254 -L266 -0.157379607101344 V254 -R283 -0.161164298973682 W281 -G286 -0.168848760631465 I257 -R268 -0.173427854687231 I257 -T264 -0.177171678072147 S259 -L266 -0.181446125073855 G253 -C269 -0.183464070017965 A271 -S280 -0.193753243675355 C269 -N285 -0.195174905417667 A271 -G276 -0.195234038502504 C269 -E278 -0.199793328092976 T272 -M279 -0.202060537264279 T255 -V265 -0.218836825485908 S256 -L266 -0.21914015520911 S256 -L267 -0.221591326491694 I258 -T264 -0.222508822254507 S259 -T264 -0.226980568667249 G273 -E278 -0.234695305968334 L267 -W281 -0.24856605524381 V265 -R283 -0.288321103051097 I257 -G262 -0.290483003458679 I257 -L267 -0.296549804149202 C269 -P277 -0.299209034524838 G253 -L267 -0.310746596968324 S259 -V265 -0.326042932605042 C269 -R283 -0.345691103873328 I257 -L266 -0.418092190227655 I258 -V265 -0.466406475975165 C269 -S280 -0.544046623862282 C269 -R282 -0.618568312622344