[Mon Aug 29 17:22:21 2016] >Input file: TMA0A0H2XP60M2G.pdb >TM segments: 373-385 MAIDEN score = -1.0640 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G374 -A379 0.0958542421134045 K377 -D382 0.0943938563552942 A379 -I385 0.09387650458177 K378 -L383 0.0737235874550093 A379 -G384 0.028286235290329 K378 -G384 0.00656516532203555 N375 -V380 -0.0493133740567262 K377 -I385 -0.0662938819510188 K378 -I385 -0.0687502898350343 K377 -L383 -0.0766590210800535 I373 -A379 -0.139941639507564 V376 -H381 -0.261024069606028 I373 -K378 -0.335139700990647 V380 -I385 -0.459613426532385