[Mon Aug 29 17:27:07 2016] >Input file: TMA0A0H3FUY9M2G.pdb >TM segments: 331-373 MAIDEN score = 20.7769 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G340 -L348 10 V337 -V350 8.85769257763837 T339 -L348 1.14198799651198 I336 -H352 1.07185571828132 T339 -L347 0.993487636017486 V351 -L371 0.993323207663741 D355 -V370 0.90033200293085 D355 -L371 0.822200196250657 D355 -L372 0.771373357568145 V350 -R373 0.738293687816643 V338 -L347 0.723994490577692 R335 -V350 0.72190898628617 V338 -L348 0.629373922768112 V337 -L347 0.629330702622505 V351 -L372 0.603248231176667 V350 -L372 0.554937895728444 V350 -L371 0.532960143983152 Q359 -V370 0.512248301630454 N331 -I336 0.487345302356713 V338 -V350 0.485177777163656 G340 -E345 0.480243375414345 I336 -V351 0.452039209702589 I336 -V350 0.399977804695916 V338 -D346 0.391147381661343 V338 -V351 0.387009851765152 L357 -R362 0.385174317423505 T339 -G349 0.344520632036125 V337 -L348 0.307235516215322 G340 -H369 0.285368499210307 V337 -D343 0.28228225779383 V350 -V370 0.282038107028 V338 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0.132810160899638 Q358 -H369 0.131795393332363 D355 -N363 0.13173606691501 V337 -L368 0.129926872290682 S360 -L371 0.129593926263403 G341 -H369 0.128641156148417 I354 -V370 0.128324249296261 V351 -S360 0.126637177765228 H333 -V351 0.125992555519848 G349 -R373 0.125604352395054 H352 -H369 0.124298500819773 S360 -D367 0.123482671427213 N342 -G349 0.119941854039111 L366 -L372 0.11811175522588 V350 -L356 0.116705242409515 V337 -V351 0.115654404367532 L347 -L368 0.113745788344533 Q358 -N363 0.11203849840801 L361 -L366 0.10645588556393 V350 -H369 0.106314938640466 R335 -I354 0.105227550106167 V351 -L368 0.104517394169642 D355 -L366 0.103127879069747 D355 -L368 0.103117390636621 G341 -L348 0.100513961997605 L357 -L372 0.0974541564791647 L357 -V370 0.094130403134673 R335 -Q358 0.0928972682539624 N344 -G349 0.0910019403196483 S360 -H369 0.090729611906488 T339 -R373 0.089343481907715 G341 -V370 0.0890816388030886 I336 -D355 0.086957146037369 R362 -L371 0.0856963627674176 I336 -L357 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