[Mon Aug 29 17:40:10 2016] >Input file: TMA0A0H3LAI5M1G.pdb >TM segments: 110-133 MAIDEN score = -1.6336 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L117 -A122 0.675916068173596 A125 -L130 0.36954975063695 T124 -L130 0.361652326131342 A125 -A131 0.319093729271339 T124 -L133 0.318350699264048 T124 -S132 0.291455016660816 L121 -R126 0.274821054211734 G123 -L130 0.273999901680117 A122 -S132 0.253834853483159 L121 -S132 0.250610792756108 C119 -R126 0.236433676312258 R126 -S132 0.122400897108379 L120 -A131 0.115411836727197 C119 -S132 0.114741150324586 V115 -L121 0.0991195371465254 G116 -A125 0.09863352187201 L121 -L130 0.098412990428292 I118 -L127 0.0914427709982267 I118 -A125 0.0768678712691262 L121 -G128 0.0731171325008368 C119 -L133 0.0674272066744397 L120 -F129 0.0646182288840302 L120 -L127 0.0610809722914949 I118 -R126 0.0577810530890595 G116 -G123 0.0506278754023706 R126 -L133 0.0394419874289671 L120 -L130 0.0332766533549123 L113 -I118 0.0319231667659166 L120 -G128 0.0263280086397089 A122 -F129 0.0219290616392045 G128 -L133 0.0161740855945398 G116 -A122 0.0040318896232332 L127 -L133 -0.00138443550290113 C119 -A131 -0.0279831055195594 I118 -L133 -0.0404273884910227 L121 -F129 -0.0412710056680341 G123 -F129 -0.0422298894261619 V115 -A122 -0.0454037262726898 T124 -A131 -0.0506191168885051 L117 -A125 -0.0562587802818761 I118 -S132 -0.0576398899870432 L117 -T124 -0.069300990993721 R126 -A131 -0.075863661938794 A122 -L130 -0.0818082087450724 A122 -L133 -0.0828498979328991 G123 -L133 -0.0976121027805956 V115 -L120 -0.110843433436546 G123 -A131 -0.111466690744267 L117 -R126 -0.121173780308097 T124 -F129 -0.12526551616358 L117 -G123 -0.128064283934677 I118 -G123 -0.130517615841351 A122 -A131 -0.134702873139608 C119 -L127 -0.136873377129791 G123 -S132 -0.151217642686994 L120 -S132 -0.164355252184195 G116 -L121 -0.172582187039827 C119 -G128 -0.173116764321245 L121 -L127 -0.18770430997806 G123 -G128 -0.200040788815619 A122 -G128 -0.209826602394759 L127 -S132 -0.220076605420768 C119 -A125 -0.222645249733876 I118 -T124 -0.233606919535057 L121 -L133 -0.234175002133405 C119 -T124 -0.237553535946576 A125 -L133 -0.256845981706524 L120 -R126 -0.283989788483012 L120 -A125 -0.303008342278535 A122 -L127 -0.303164549658384 L121 -A131 -0.309072651563466 L120 -L133 -0.456640848186092 A125 -S132 -0.534903534252746