[Fri Aug 26 17:53:50 2016] >Input file: TMA0A0H3LB37M1D.pdb >TM segments: 215-261 MAIDEN score = -5.8691 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V238 -I244 0.942927358205259 V238 -S243 0.846372705935088 H242 -D247 0.519106775234558 D247 -A254 0.51880229547165 I220 -R226 0.496699869295467 L235 -N245 0.48809983623549 N245 -H250 0.39161673404644 G239 -I244 0.371714749156932 L221 -R226 0.35374647939955 E230 -F249 0.339257341310536 V217 -L222 0.327651836212782 P233 -S241 0.304976382592826 S243 -H250 0.29988966691716 V234 -N245 0.272575748481921 V234 -V248 0.269364176588233 S243 -G251 0.223382785299417 S243 -V248 0.22063057504262 V238 -V248 0.220221377261403 L246 -N252 0.203394009423885 L235 -S243 0.198893058651337 V217 -R226 0.19183815231742 I244 -G251 0.174573310083242 S243 -M253 0.168405516390193 Y240 -V248 0.158768984158987 T231 -F249 0.157039699914608 G215 -L221 0.156389164974356 G239 -L246 0.153444359985809 I220 -A225 0.153199770766925 L256 -Y261 0.145996707304132 D247 -M253 0.138363217719834 S243 -N252 0.135344577314427 V234 -L246 0.128640851416427 T231 -I244 0.128324749074447 V238 -N245 0.127319765135697 S241 -D247 0.12565880524493 G219 -I224 0.1210742986843 S218 -E230 0.11949500710509 E230 -L235 0.109864797772266 S243 -A254 0.105134651222773 G239 -F249 0.102442741352231 A232 -N245 0.0989987062490392 Y240 -N245 0.0981151349234057 A254 -L259 0.0967958641621438 R226 -V234 0.0957584329954537 T231 -G239 0.0940832968156494 A225 -P233 0.0906327919671241 L237 -L246 0.0900673612292173 V217 -A225 0.0894085094786297 V238 -G251 0.0892006889190842 T231 -V248 0.0889168429859932 L221 -V228 0.0870890751328026 H250 -S255 0.0824276295174295 V238 -H250 0.0785261957774637 I216 -A225 0.077813679762273 L221 -V227 0.0762474479496253 L235 -D247 0.0756988072168738 V227 -L235 0.0752434755944327 I244 -N252 0.0745291275597002 T231 -S243 0.0736648428347411 I220 -V228 0.0725524098935695 A225 -E230 0.0706544208138218 S243 -S255 0.0701280163833049 A232 -H242 0.0672301149790799 N245 -A254 0.0633515897712189 P233 -V248 0.0611541233160429 S218 -I224 0.0587268328917201 S255 -I260 0.0534553842993093 R226 -P233 0.0531594382478533 I216 -L221 0.0483111810767061 L235 -Y240 0.0454863273243689 G219 -V227 0.0443199183089336 A232 -Y240 0.0398977684549844 L246 -L256 0.0377662539635377 S218 -G229 0.0353866977843191 T231 -N245 0.0351552742295493 T231 -D247 0.0347197736914964 S218 -V227 0.03412465750369 G219 -A225 0.0340364966251885 A232 -S243 0.0332877431569774 L246 -S255 0.033000081139237 V217 -V227 0.0325898490001215 V234 -H242 0.0309530801603923 H242 -G251 0.0296466691050825 L237 -F249 0.0290309694110091 M253 -L259 0.0260012270397461 E230 -V238 0.0250334353895556 G251 -L256 0.0232654720105554 M253 -L258 0.0224930660479945 I220 -V227 0.0216601345076324 D247 -S255 0.0181161756819463 F249 -A254 0.0180478580575563 L235 -F249 0.0176553698804194 V248 -A254 0.0169505782260553 V217 -I224 0.0158253086685602 A232 -S241 0.0153382736987382 N245 -N252 0.0149392199315041 E230 -G239 0.0130026626030675 L235 -I244 0.0123739295110585 V227 -L237 0.0120840846068533 L246 -M253 0.0104687309386922 L221 -G229 0.00936812681881083 S223 -T231 0.00776883242412163 P233 -N245 0.00710629152332221 L237 -D247 0.00174542802786837 P233 -F249 -0.000987967156421021 G215 -L222 -0.00195390944598817 A225 -A232 -0.00236520318602906 F249 -S255 -0.00530365000969013 V236 -I244 -0.00743515263321104 S223 -V228 -0.00902273614450078 G239 -D247 -0.0103490193834698 G229 -L237 -0.0149952463801166 V234 -H250 -0.0154705423110482 L222 -E230 -0.0154763436666884 T231 -L246 -0.0186171407436522 I224 -P233 -0.0214135000636961 T231 -Y240 -0.0223306602562669 V248 -S255 -0.0223568918079923 P233 -L246 -0.0225906790253969 N245 -S255 -0.0267022046511207 E230 -V248 -0.0279387650558518 L246 -G251 -0.0292742187360417 H242 -V248 -0.0312044600311197 A232 -V248 -0.0329566789736417 G229 -V236 -0.0343910303680257 V227 -F249 -0.0386554297596167 A232 -I244 -0.0386577984306093 L235 -H250 -0.0392295009776289 V248 -M253 -0.0397250491552406 V227 -V236 -0.0406113139193254 A225 -V234 -0.0461617253860949 V236 -S241 -0.0480222858923024 V234 -G239 -0.0513713428119198 S218 -R226 -0.0528624090599772 I244 -M253 -0.0557032402345856 A232 -L246 -0.0623480223216752 S223 -A232 -0.0627084072348101 S223 -E230 -0.0656595115667655 L222 -G229 -0.0663239070480426 S243 -F249 -0.0665917451287227 R226 -L235 -0.0683465986956753 R226 -T231 -0.0685888514261528 E230 -N245 -0.070963681369986 I224 -A232 -0.0716909018209444 D247 -N252 -0.0758808159822204 P233 -S243 -0.0773643762315661 I216 -S223 -0.0796010429531524 V227 -N245 -0.0797972114734251 S241 -F249 -0.0799837254890235 V228 -V236 -0.0816792699189268 I244 -S255 -0.0834751165809529 V236 -V248 -0.0838635186235339 V234 -D247 -0.0846304188853857 V236 -L246 -0.08504596834808 A232 -G239 -0.085820163401233 L222 -T231 -0.0951297335403674 I244 -A254 -0.0992450247531345 P233 -I244 -0.10103489347702 S241 -L246 -0.101261166415615 V228 -L237 -0.102816786762436 G229 -V238 -0.103565315772505 V228 -N245 -0.104745521498688 I220 -G229 -0.109594443873798 S218 -V228 -0.109812872793764 V227 -A232 -0.110229527953415 G215 -I220 -0.110537297702857 N245 -M253 -0.112467764645556 T231 -H250 -0.112893091862611 Y240 -L246 -0.120400903617044 I224 -G229 -0.121078610221906 P233 -Y240 -0.1290091179381 V236 -F249 -0.140406930274342 G239 -N245 -0.144889516547958 G219 -R226 -0.146395497886852 E230 -L246 -0.146443804812246 G239 -V248 -0.146751879523817 S223 -G229 -0.150342042941929 I220 -E230 -0.15309907274614 L221 -E230 -0.159214791513526 E230 -L237 -0.159839863462328 A232 -F249 -0.16261817449849 L222 -V228 -0.163109123335104 L235 -L246 -0.163472875045166 L237 -N245 -0.164921216194264 L237 -V248 -0.164992420938135 T231 -V238 -0.165297852562858 N245 -G251 -0.166245588478646 P233 -V238 -0.167231147062306 D247 -L256 -0.168561483751568 T231 -V236 -0.168978901324812 R226 -A232 -0.170479744652844 V217 -S223 -0.180134252043249 V227 -P233 -0.186122855842293 P233 -G239 -0.188906760277214 V238 -D247 -0.191779339861119 V228 -L235 -0.192683598193119 L246 -A254 -0.195840969706707 I224 -E230 -0.196014219479281 Y240 -D247 -0.196530426075919 V234 -I244 -0.198832720084791 A225 -T231 -0.203854689030842 I216 -L222 -0.205179188638337 V228 -P233 -0.211477637264617 H242 -F249 -0.217047307460827 S218 -A225 -0.220140248534358 I224 -T231 -0.222026769672897 L235 -H242 -0.227331208177156 G229 -V234 -0.238475140508612 T231 -L237 -0.238640724360904 V236 -D247 -0.238815232888807 V236 -H242 -0.246266781769478 A232 -L237 -0.250658165946822 V236 -N245 -0.252857993269513 I244 -F249 -0.263706476250033 V234 -S243 -0.269660134718121 V238 -L246 -0.276666497933746 V236 -S243 -0.295662801911136 V228 -V234 -0.296286234610037 V238 -F249 -0.305418360016042 P233 -H242 -0.30831128817133 L237 -H242 -0.308908000453217 V234 -F249 -0.310039879157986 L237 -I244 -0.311051193520071 E230 -V236 -0.3121153161654 S241 -V248 -0.329727902598214 V234 -S241 -0.333637446693443 G229 -L235 -0.334062288877588 L235 -V248 -0.337813190742573 L237 -S243 -0.338403438618628 L235 -S241 -0.339469312861428 V227 -V234 -0.345244618917158 A232 -V238 -0.366302221912807 V234 -Y240 -0.376956114191352 S218 -S223 -0.398266020166114 L222 -V227 -0.425650144502125 I244 -H250 -0.445784986349298