[Fri Aug 26 17:56:04 2016] >Input file: TMA0A0H3LBU7M1D.pdb >TM segments: 154-228 MAIDEN score = -4.8582 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E210 -H215 1.05618935456886 V164 -D192 0.985449105964526 V167 -E188 0.978252877771853 A166 -E188 0.72369769189722 L179 -A195 0.603056609724634 V206 -T216 0.601619838467219 Y209 -T216 0.568696673282911 V167 -Q189 0.515783048722134 S186 -G193 0.418595650562978 V164 -R191 0.399610337920174 A168 -E188 0.356088343162651 V167 -P187 0.349284096377296 L207 -T216 0.332488731783696 G205 -H215 0.307124593109427 P187 -D192 0.306607545228258 T175 -T181 0.303166321411803 T175 -P187 0.28397857440048 V167 -D192 0.27641703490316 L163 -R191 0.275830309867761 D196 -V204 0.263419125451629 P187 -G193 0.261887186407496 G162 -N194 0.260692972982232 A170 -S186 0.256115253311093 V201 -V206 0.253385382707727 Y202 -P217 0.252358295455047 A166 -S186 0.248157995714502 V190 -D200 0.24469501733568 G180 -D196 0.241485338291775 Y184 -D192 0.239558223551374 S186 -A195 0.238136083489582 V206 -P217 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