[Mon Aug 29 17:50:24 2016] >Input file: TMA0A0H3LFQ3M1G.pdb >TM segments: 841-900 MAIDEN score = 16.2209 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L875 -I889 10 G876 -I889 10 L873 -I889 0.854768896062438 I874 -I889 0.768492151846722 L873 -S887 0.737412149197949 L873 -F888 0.691707542756847 L864 -L869 0.678708578117521 L842 -V847 0.642815652215766 G876 -F888 0.639253403754124 G876 -S887 0.592470351279422 I894 -N899 0.536676338511169 S855 -L861 0.497759089059865 I841 -L846 0.478564919882227 L875 -F888 0.453177588154196 L857 -S862 0.421300958234286 Q877 -I889 0.409246004514556 I874 -M879 0.341872563233211 L875 -V892 0.333634990052712 G876 -V892 0.328653783150992 E878 -G895 0.32610723893141 E878 -L883 0.304063708322278 L875 -L890 0.296334983486934 S882 -G895 0.285374383999348 G867 -L873 0.280070209377192 L869 -G876 0.276515710739507 V856 -L861 0.275052519149922 L869 -G885 0.274927935638997 Q872 -M879 0.260271501388457 Q877 -Y898 0.251667276988149 V870 -E878 0.251215184233258 L873 -H880 0.241470259949738 I894 -M900 0.228225858859362 Q872 -P884 0.22100026181665 V892 -M900 0.200269837645221 M879 -P884 0.181711194697748 L843 -P849 0.179788957212168 P884 -L891 0.177050397626648 G876 -Y898 0.172546365659132 R844 -P849 0.171614621459622 Q877 -F888 0.167077371526629 F871 -F888 0.162343544805912 G876 -G885 0.161656582617148 L875 -L891 0.160335249733689 I889 -I894 0.158035117015712 G854 -L861 0.156741108264133 S862 -L869 0.152603261492976 I874 -H880 0.145751080801333 G885 -L891 0.14558389448362 G865 -Q872 0.145397029592877 V870 -H880 0.143881183041694 L891 -M900 0.142593366284018 E878 -I894 0.14229947090774 G854 -A863 0.142074561898847 L886 -I894 0.140335191717843 M879 -G895 0.139517843334118 E878 -L891 0.139403480467831 I841 -V847 0.137910592130948 I866 -I874 0.134757295626809 I874 -V892 0.131218812605476 L852 -L857 0.130064089670996 G865 -F871 0.129939306445323 G876 -P884 0.129225870614069 A848 -I853 0.128727252165179 Q877 -G885 0.125885579687578 L883 -L891 0.12056579275584 I841 -I850 0.119243137575386 I874 -L883 0.112859381180888 T868 -S887 0.111335885042146 G876 -A896 0.111150886403095 P884 -G895 0.109719126139394 L869 -P884 0.108445297063275 T868 -I889 0.10712983206787 T868 -L873 0.106725448696339 V870 -V892 0.105261866848791 Q872 -I889 0.105084231385378 L852 -L861 0.104316224764425 S855 -L864 0.10424963433258 L890 -A896 0.104214626280427 S887 -Y898 0.104134047027282 F871 -Q877 0.103801785964166 V856 -L864 0.102997472279182 I874 -G895 0.102500062360499 L869 -L891 0.0979491531501515 I858 -A863 0.0965621528355762 I858 -L864 0.0938017842234385 L873 -S882 0.0928262727121885 S887 -I894 0.092586213355502 S887 -G895 0.0917013203626307 L869 -L890 0.0871884563949212 I874 -P884 0.0842395941426835 S862 -T868 0.0834194363390326 S862 -S887 0.0827550429668147 I874 -A893 0.0817629828786552 Q877 -L890 0.0797231461801537 L873 -G885 0.079041526562041 M879 -L886 0.0779873327683174 S887 -A893 0.0771524718896899 Q877 -L891 0.0759902889351025 S862 -G885 0.0754945943974572 L864 -P884 0.0736490951527368 L886 -V892 0.0721317537790576 Q872 -L886 0.0715448965731778 H880 -S887 0.069524163512511 I841 -P849 0.0692020581430306 L869 -L883 0.0688963349452516 H880 -G895 0.0656925963462847 A893 -M900 0.0634817310938871 G876 -L883 0.0630881510871593 V870 -F888 0.0619948700655897 I853 -S862 0.0616877480036422 I889 -A896 0.0610962665855617 L873 -I894 0.0591134482565778 S882 -L891 0.0590260435544283 A845 -Y851 0.0577905409214106 I866 -P884 0.0577238544756349 L890 -G895 0.0555585339242146 L873 -G895 0.0500335838608112 S882 -S887 0.0499830282273734 L873 -L883 0.0485267938557072 L869 -M879 0.0482765060052941 L875 -G885 0.0452166303743651 F871 -M879 0.0425844159737589 Q872 -V892 0.040606071030215 P884 -I889 0.0404201153954522 T868 -L886 0.0399955832646022 S862 -L886 0.0380371841571145 A893 -N899 0.0374599468126586 G876 -S882 0.0372940846595742 V892 -N899 0.0372591172117864 L864 -L886 0.0362394487719886 T868 -Q877 0.0340801852203156 L873 -A893 0.0332774757250171 S855 -G865 0.0331713476260866 T868 -G885 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