[Fri Aug 26 18:07:37 2016] >Input file: TMA0A0H3LFZ6S2D.pdb >TM segments: A484-500_A591-600_A700-706 MAIDEN score = -6.2964 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T491A-P704A 1.31278213404828 L489A-D599A 0.824085486118673 F488A-I701A 0.488240182255957 T491A-S702A 0.386556600758114 L492A-P704A 0.379349383938951 T491A-Y705A 0.371155593881459 L494A-P704A 0.3292713958135 S486A-G703A 0.295854953607106 R490A-M706A 0.276264313174001 S495A-P704A 0.241961988812683 K485A-E600A 0.231158919019808 T491A-T500A 0.231104354463129 S486A-S495A 0.219637877783613 F488A-E600A 0.210026942368749 K485A-Y700A 0.208015327570843 L494A-Y705A 0.20384668281917 L489A-V598A 0.189596966906667 T491A-I701A 0.188107404755767 L489A-V597A 0.187883646750258 R490A-V598A 0.18510834444965 L496A-P704A 0.177312484418849 I493A-I701A 0.166675645938324 S495A-F595A 0.152478615476794 L492A-M706A 0.150945919121126 F488A-S702A 0.148406735951369 K485A-G703A 0.147607147451724 E487A-E600A 0.147272372684726 I493A-V597A 0.143256506980861 R490A-A498A 0.141019983366845 S486A-L494A 0.136347894246639 L489A-Y705A 0.135058131736149 L492A-L594A 0.134649684478818 I493A-G703A 0.132248569907391 L496A-P592A 0.129403778222095 L489A-V596A 0.128143874852283 L492A-Y700A 0.126418789399025 E487A-L492A 0.110502380935975 R490A-G703A 0.109280017609926 S486A-I701A 0.103314292557363 L496A-M706A 0.10296117734364 T500A-P592A 0.101312056551881 R490A-F595A 0.101109979586506 L496A-V596A 0.100291186999621 M499A-P704A 0.0960971334191205 L492A-V598A 0.0924009021556169 L494A-V597A 0.0920655835193176 Y700A-Y705A 0.0898138717949104 L496A-Y705A 0.0895823392322299 M499A-M706A 0.0888173146221631 V497A-T593A 0.0886522374526519 I493A-T593A 0.0875195811908377 T491A-M499A 0.0874728936449409 E487A-Y700A 0.0817924560428498 K485A-I493A 0.0808796056964689 L496A-L594A 0.0796399076781684 L496A-I701A 0.0780557745949562 L496A-V597A 0.0762889556798829 K485A-D599A 0.0760802490127751 L591A-V596A 0.075979193517155 A498A-G703A 0.0740555377394134 E487A-M706A 0.0737332962220307 M499A-Y705A 0.068982422953315 L492A-Y705A 0.0682327532918769 K485A-S702A 0.067279785237194 R490A-S495A 0.0664395506621815 E487A-Y705A 0.0630459613647901 S495A-S702A 0.0627543268771937 T500A-F595A 0.0626461703877199 V497A-V596A 0.0620478348098406 G484A-E600A 0.061453177525951 G484A-L492A 0.0610469952706367 F488A-F595A 0.060677083087965 F488A-P704A 0.0588008189535985 E487A-G703A 0.057904654415581 S486A-I493A 0.0557634205811146 V497A-P592A 0.0556506822470104 G484A-T491A 0.0479612966251182 L492A-S702A 0.0456531395706641 M499A-P592A 0.0380573224763083 L492A-D599A 0.037253349996563 M499A-L594A 0.036623430630021 M499A-T593A 0.0345943334529326 L494A-F595A 0.0345070884654435 R490A-V596A 0.0322507929562916 K485A-V597A 0.031383168962591 L492A-F595A 0.0283305875291799 K485A-I701A 0.0238549646313793 V497A-G703A 0.022256725554282 R490A-D599A 0.0219936724770333 S495A-I701A 0.0214973203793711 E487A-V597A 0.0181260180406703 E487A-V598A 0.0177802812250376 V497A-L591A 0.0167362938010722 L489A-L594A 0.0161323362572894 G484A-D599A 0.0159768376465679 M499A-F595A 0.0104141629806804 F488A-L496A 0.00964964451691586 S495A-T593A 0.00743671767928866 G484A-V598A 0.00635063296740501 V497A-V597A 0.00556870626405193 L489A-Y700A 0.00463582594493062 V497A-Y705A 8.10393555998878e-05 S495A-L594A -0.000947978650337845 I493A-P592A -0.00121215079935322 G484A-L489A -0.0039724879243721 T491A-V597A -0.00765314806348094 E487A-I701A -0.00931272257282068 R490A-Y700A -0.00946413094815757 V497A-F595A -0.0120619756855351 F488A-G703A -0.0139445431733733 L494A-T593A -0.0147630763920277 L494A-S702A -0.0149602483124394 S495A-Y705A -0.0173177613856192 G484A-Y700A -0.0223324549629087 F488A-V598A -0.0226882797976016 G484A-P704A -0.0230034248524268 L489A-E600A -0.0248246362616982 A498A-Y705A -0.0282408588721825 V497A-S702A -0.0283280395100256 R490A-S702A -0.0302194310257868 A498A-T593A -0.0307639265482658 L496A-G703A -0.0319272606379095 F488A-V596A -0.0357135343942039 I493A-S702A -0.0359149683469835 L492A-V596A -0.0364409227974942 S495A-V597A -0.0373533281969198 S486A-V596A -0.0416582848869611 I493A-M706A -0.04370851279932 E487A-S495A -0.0478421090630136 G484A-S702A -0.0496380089998674 L489A-S702A -0.0498802499198359 S486A-Y705A -0.0509336879296183 L492A-V497A -0.0516861288114967 T491A-V497A -0.0519760331916057 L494A-I701A -0.0540601686608593 I493A-L594A -0.0544697630673388 T491A-D599A -0.0548174824832648 V497A-M706A -0.0572598414512808 R490A-Y705A -0.0605415621805703 S486A-S702A -0.0662452274013676 S486A-Y700A -0.0667785883630773 I493A-Y705A -0.0671957365942477 F488A-S495A -0.0703979084028734 T500A-L591A -0.0786432307982303 T491A-Y700A -0.0884950862227583 G484A-I493A -0.0889629218200438 I493A-F595A -0.0905780036472574 F488A-V597A -0.0922946556557314 T491A-V598A -0.0931833207617627 E487A-D599A -0.093447382083572 I493A-P704A -0.0951612359298575 L489A-F595A -0.0962246272805356 K485A-V598A -0.0964920614324489 L489A-G703A -0.0996669476600127 L492A-T593A -0.10052872387102 L496A-S702A -0.101313938645663 T500A-L594A -0.106887866610004 L494A-L594A -0.108031877239117 L494A-V596A -0.109480835912764 K485A-R490A -0.109591441346278 T491A-F595A -0.109962949504466 G484A-R490A -0.117456295256865 A498A-P704A -0.117583869811637 G484A-G703A -0.120006194923379 A498A-S702A -0.125984059007961 L492A-T500A -0.129822610345133 T491A-A498A -0.130167218947046 L492A-M499A -0.13385868851989 S495A-G703A -0.135662803484367 E487A-S702A -0.139380242512952 F488A-V497A -0.141205703520407 R490A-E600A -0.144559990023967 I493A-D599A -0.145751874960804 S486A-E600A -0.146133312899696 F488A-Y705A -0.147071459779291 R490A-V497A -0.151319740389071 R490A-V597A -0.152331747642667 K485A-P704A -0.155271369804579 L489A-L496A -0.156206908957417 E487A-P704A -0.157136519123826 G484A-I701A -0.157981074041254 L489A-A498A -0.158197131293606 L489A-P704A -0.159698688842837 F488A-Y700A -0.159817999000221 E487A-L496A -0.161396938936467 I493A-V596A -0.176795685389539 K485A-L492A -0.178109831976566 L496A-F595A -0.179991668569818 L494A-G703A -0.185838776856014 S495A-T500A -0.185981998823582 S486A-D599A -0.190324045785743 S495A-M706A -0.192112111139008 T491A-M706A -0.192275835939816 E487A-L494A -0.192824977256477 T491A-G703A -0.19360283511372 E487A-I493A -0.194640402374494 V497A-P704A -0.196158445087329 I701A-M706A -0.202357289995032 L494A-M706A -0.203927051666605 I493A-T500A -0.207487717374967 S486A-L492A -0.210220866882237 I493A-V598A -0.210251177294646 K485A-L494A -0.210828352905284 L492A-I701A -0.218755364315527 L489A-V497A -0.2292089012568 V497A-L594A -0.233220024080998 T500A-T593A -0.245427037852306 F488A-L494A -0.25456159534835 R490A-M499A -0.256274926204519 L492A-G703A -0.258709268152385 L496A-T593A -0.264909973277248 A498A-M706A -0.26923490748457 K485A-T491A -0.270671714326441 S486A-V597A -0.271373404120969 F488A-D599A -0.279151677032924 R490A-L496A -0.282222173947261 L492A-V597A -0.287053003046594 S486A-T491A -0.288554813330184 S486A-P704A -0.290347960093568 L492A-A498A -0.304848865105714 L494A-T500A -0.305542383031817 F488A-I493A -0.30938554255501 L489A-S495A -0.328455288179204 T491A-L496A -0.334221014686892 L494A-M499A -0.336641552141505 S486A-V598A -0.359080142134393 L489A-I701A -0.391065990879498 R490A-I701A -0.400491189034521 I493A-M499A -0.401289051848431 L489A-L494A -0.418341453859612 I493A-A498A -0.475047462023301 R490A-P704A -0.605966279987916