[Fri Aug 26 18:10:13 2016] >Input file: TMA0A0H3LL39M1D.pdb >TM segments: 99-130 MAIDEN score = -6.5164 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F107 -L112 0.705141929221957 R102 -I109 0.515491499048109 T123 -E130 0.403948187818618 I109 -I114 0.37039563858913 I106 -P111 0.34113269889066 T110 -A115 0.327024622584417 A115 -G122 0.318587257818782 I106 -L112 0.276721906837428 E99 -F107 0.272676263074642 I106 -R113 0.233485535767088 V121 -E126 0.223445434278061 F116 -G122 0.209661709545495 F107 -A115 0.17021088282504 P111 -L119 0.168023200473328 A103 -T110 0.167038338691716 I109 -I118 0.162534328890086 I118 -E126 0.12767244751255 R113 -I118 0.112599623595204 L112 -L120 0.112380848401276 A103 -P111 0.110570270466448 V121 -T129 0.107938259274065 N105 -L112 0.107156017242089 I114 -G122 0.107130704755767 R102 -P111 0.0967932367880224 L117 -T124 0.0963222885259132 A103 -I109 0.0962653077338302 P111 -F116 0.0882609910754404 L117 -L125 0.0860691981421922 L119 -L128 0.0828278352879579 G122 -E130 0.077387036971913 F107 -L117 0.0714683347513754 N105 -I114 0.0708223981216323 R102 -T110 0.0653404851625326 I104 -I109 0.0633246025937781 I104 -R113 0.0602668387789767 F116 -L125 0.0523966240726299 R113 -V121 0.0494214266167499 V108 -I114 0.0439355322337143 G122 -L128 0.0374171869689066 F100 -I109 0.0258426928726694 F116 -T124 0.0252590084269324 V108 -F116 0.0225738896719019 A101 -I109 0.0184215584471685 F107 -I114 0.0146397490060428 F116 -V121 0.00978452714925737 L119 -L125 0.00599176045661487 F100 -I106 0.000927333614954229 L119 -T129 0.000404619801537054 R113 -L120 -0.000605059811086939 F100 -V108 -0.00230462634613504 I114 -T123 -0.00642126446075419 V108 -I118 -0.00729103555457655 R102 -L112 -0.00743346645565701 I104 -P111 -0.0118735369013395 L120 -E126 -0.0131437078713939 V108 -L117 -0.0161753991894287 L112 -L119 -0.0162078541656436 L120 -V127 -0.0253813308919959 T110 -F116 -0.0318164631361844 N105 -A115 -0.031872974234854 A115 -T124 -0.0324011463602192 I106 -A115 -0.0355703448101954 I118 -V127 -0.0567163882475228 A101 -F107 -0.0663484845596373 E99 -N105 -0.067601884765355 F107 -F116 -0.0725630808370061 I104 -L112 -0.0746219375797239 T110 -L119 -0.0747871669940778 A101 -V108 -0.0755444525625713 F116 -T123 -0.0784363265964618 T110 -L120 -0.0797862687131849 I118 -L125 -0.0801419203845302 A115 -T123 -0.0803086192382996 N105 -T110 -0.0854174922036043 I109 -L117 -0.091350666499446 F107 -R113 -0.0931245674798364 L120 -T129 -0.0998140521821396 I114 -L120 -0.103250373621765 A103 -L112 -0.103676230115873 F100 -N105 -0.104794921750498 L125 -E130 -0.105269183589649 P111 -L120 -0.108275470178411 I104 -T110 -0.111910658929192 I114 -V121 -0.115389312973543 L120 -L128 -0.12064914632232 I109 -A115 -0.122713279582468 E99 -I109 -0.129248466114055 R102 -F107 -0.133166140012108 E99 -I104 -0.133708067483446 V121 -E130 -0.136779055901256 I118 -T123 -0.142168547304858 L117 -E126 -0.142541133806916 I106 -F116 -0.1442112231326 F100 -F107 -0.14775023711268 T124 -E130 -0.163179572331768 T110 -L117 -0.165606894038099 N105 -R113 -0.165734303624112 R102 -V108 -0.171662030178812 V121 -L128 -0.174195507586027 L119 -V127 -0.182370259902985 A103 -R113 -0.182589796964947 E99 -V108 -0.186681044953722 P111 -I118 -0.186945347719799 L112 -L117 -0.187975983505901 G122 -T129 -0.189976019538115 R113 -L119 -0.194533303950227 I106 -I114 -0.195656530395472 E99 -I106 -0.19694689022306 V108 -A115 -0.197608345942107 I109 -F116 -0.197803826828497 N105 -P111 -0.202275389283954 L119 -E126 -0.203071992624676 G122 -V127 -0.204597989933667 I118 -T124 -0.218825649229398 L117 -T123 -0.249411222817232 T110 -I118 -0.260970969517211 L119 -T124 -0.27192245735907 T124 -T129 -0.29715459586649 A115 -L120 -0.302906559081891 A115 -V121 -0.303874577763225 L117 -G122 -0.306394747532448 T123 -L128 -0.327254321023564 V121 -V127 -0.348722536181128 I114 -L119 -0.356750071152725 T123 -T129 -0.364272463690143 L112 -I118 -0.417464237692006 L120 -L125 -0.418198462433265 A103 -V108 -0.450020254365346 A101 -I106 -0.453557632120878 P111 -L117 -0.472346519689429 V108 -R113 -0.539519875325922