[Fri Aug 26 18:25:57 2016] >Input file: TMA0A0H3M6K3M1D.pdb >TM segments: 153-179 MAIDEN score = 0.9731 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D160 -R165 0.268100317976236 G162 -A168 0.261355955952796 G162 -V167 0.175721935852759 R165 -A170 0.158837358139773 S171 -G176 0.139531284323816 D160 -A168 0.133890028518331 L158 -L163 0.133285619640184 V164 -A169 0.107842519459106 A166 -S171 0.0998616348608634 I172 -V177 0.0901253656635111 S174 -L179 0.0749627620491315 G162 -A169 0.0686176220422454 V167 -I172 0.0680518260505008 A159 -A168 0.0650664176807454 F161 -A168 0.0510841530676536 A159 -A166 0.0450128554424808 F161 -V167 0.0405073045190707 L163 -A168 0.0327778166799984 T173 -L179 0.0257143701772216 R165 -I172 0.0209660383397037 A159 -V164 0.00499049770271043 A170 -T175 -0.00928203466769473 K157 -G162 -0.0263919180916901 A170 -G176 -0.0362092220301609 T173 -I178 -0.0514015925970139 D160 -A169 -0.056121887438235 R165 -S171 -0.0990884614604766 A159 -R165 -0.107442065406335 D160 -V167 -0.108289161051751 D160 -A166 -0.134033281220558 V156 -F161 -0.141604370057102 F161 -A166 -0.143039506799118 D153 -L158 -0.180251903833016