[Fri Aug 26 16:30:16 2016] >Input file: TMA0A0H3MBP0M1D.pdb >TM segments: 81-106 MAIDEN score = 2.9681 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I101 -A106 4.38180686211763 V98 -L103 0.726526441508986 A97 -L105 0.651259293535338 V98 -A106 0.642313263090966 V98 -L105 0.641831676077348 A87 -F92 0.606886218462623 A93 -V98 0.589660219585587 E94 -G99 0.454962511534396 S96 -L103 0.400288627366089 S96 -S104 0.38372203141814 A85 -A93 0.376045945405229 A81 -A87 0.338956219352305 V95 -L102 0.288432809178206 P82 -S89 0.27113624438795 V95 -G100 0.260268239511232 V98 -S104 0.254377500984057 V90 -V95 0.251270650703807 A97 -L103 0.194275135415194 A87 -S96 0.18949503141443 I86 -V91 0.172422443697333 G100 -L105 0.148082096073498 A97 -L102 0.11845018238583 A81 -S89 0.118067202482016 A93 -L105 0.0976924674048698 E94 -S104 0.0974573022438636 V90 -A97 0.0862777843132077 V95 -I101 0.0808241230968418 V91 -S96 0.0801079804381226 S89 -V98 0.0765415307331985 E94 -L102 0.0759295629550931 V95 -L103 0.0624567309023583 A84 -A93 0.0451172707053599 V83 -T88 0.0450966813539675 S89 -S96 0.0319907020564747 A87 -V95 0.0184789902290172 P82 -V90 0.0153161126322843 V91 -L103 0.0123134016781843 G100 -A106 0.00500741056055887 S89 -G99 0.00391287714480182 A93 -S104 0.000640963850297105 A84 -S89 -0.00105929445943498 S89 -L103 -0.00407910584800208 F92 -G100 -0.00477510377265267 A85 -V90 -0.00796905267855408 V83 -F92 -0.00862015925768178 V95 -A106 -0.0115974883411216 T88 -E94 -0.015387031774817 F92 -S104 -0.0176482345699975 A93 -I101 -0.018395105545614 V91 -V98 -0.0220733180992614 A93 -G100 -0.0266906754061451 P82 -T88 -0.0327777440536661 T88 -A93 -0.0347096603101171 P82 -V91 -0.0521640931037393 T88 -V98 -0.0529286644882063 A87 -A97 -0.0536200424494924 I86 -S96 -0.0662541238994918 A85 -F92 -0.0667899219315004 A93 -A106 -0.0676049048773515 V83 -V90 -0.0699451270776006 A81 -T88 -0.0732469921660859 I86 -F92 -0.0777729652432999 V95 -L105 -0.0781367452817303 E94 -L105 -0.0796674983384147 V90 -V98 -0.0852846407610366 V91 -G100 -0.0885258647595495 E94 -A106 -0.0887961123648773 A85 -E94 -0.0907100226494602 P82 -A87 -0.0909227001935664 V91 -A97 -0.091296228609945 E94 -L103 -0.0976011916048805 V90 -G99 -0.101386088177257 T88 -A97 -0.102983854151472 S96 -L105 -0.104718047217343 V91 -L102 -0.104871982589541 G99 -S104 -0.108947098576925 V83 -V91 -0.109856572206629 F92 -L103 -0.120936425478843 E94 -G100 -0.122034010244474 V91 -G99 -0.126047659217138 S96 -I101 -0.12609763227605 I86 -E94 -0.131794422180537 S96 -L102 -0.131979601488037 I86 -V95 -0.132049144693829 A93 -G99 -0.133285510823571 F92 -G99 -0.136192479316754 S89 -E94 -0.141325954190584 F92 -I101 -0.143891970134076 A84 -F92 -0.147300394299588 A87 -E94 -0.150840806033412 A84 -V91 -0.157109573464392 F92 -L102 -0.158328172345019 A84 -V90 -0.161194728350237 E94 -I101 -0.164011802402791 S96 -A106 -0.192377825118215 S89 -A97 -0.200312819656063 S89 -V95 -0.200389073081599 G99 -A106 -0.207705644275759 T88 -S96 -0.224807664465003 A93 -L103 -0.243002247573953 A81 -I86 -0.246615177518805 F92 -V98 -0.252270415437226 A93 -L102 -0.253339646859361 V83 -S89 -0.260510613998514 V95 -S104 -0.263724895135951 A85 -V91 -0.265620988672967 T88 -V95 -0.265975545470634 I86 -A93 -0.268279400586509 V90 -S96 -0.299893416894951 G99 -L105 -0.386047186384765 A97 -A106 -0.403898745638707 A97 -S104 -0.423062875193191 A87 -A93 -0.423710757455204 F92 -A97 -0.451864389082681