[Fri Aug 26 16:31:19 2016] >Input file: TMA0A0H3MCD2M1D.pdb >TM segments: 606-641 MAIDEN score = -3.3873 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R614 -P633 1.00873514734368 R613 -P633 0.978750204982874 L607 -M612 0.759084521631079 Q611 -L637 0.606101467417393 G636 -S641 0.564898270008015 G610 -P633 0.52894594546685 L620 -P625 0.439153309055971 Q611 -G636 0.376665365781667 R614 -D631 0.346468045129142 G610 -L637 0.334941273139557 S608 -P633 0.332187811964863 G609 -R614 0.298956743153616 Q611 -E632 0.290146751379619 R613 -E632 0.285668002310365 G610 -D631 0.262868308203672 Q611 -G619 0.243973451525704 L634 -S641 0.237900666338569 Q611 -S641 0.237312721724188 G609 -E632 0.198192792896164 R614 -L637 0.194863024506294 M612 -L630 0.192650437861448 G610 -L634 0.18834256289216 V615 -D631 0.184020771971496 R613 -R623 0.171963943224798 G619 -A627 0.162566150523029 S608 -A639 0.161919404182331 G619 -L628 0.147172539597698 P625 -L630 0.146106214603817 S608 -S641 0.143294219833603 P633 -D638 0.141719553869617 Q611 -A639 0.132413452386045 G610 -A635 0.130611242364168 M612 -A635 0.128419102603748 R614 -G636 0.126764458223428 V616 -A624 0.122598785058549 S608 -A640 0.120969692512653 V616 -D631 0.117912421202508 Q606 -R614 0.114343869961227 G610 -A640 0.113116164779572 L617 -L637 0.110811961192146 R614 -A622 0.10851358007992 V615 -G636 0.108100403484798 L617 -A622 0.10622327612176 L617 -P625 0.103839618116893 G619 -R626 0.100376236318833 R613 -D638 0.0966246531747403 P633 -A639 0.0959798337095052 G610 -D638 0.0949126557218296 L607 -A618 0.0946772359154382 Q606 -R613 0.0944541190407246 L630 -A635 0.0938671399626172 A618 -L637 0.0917342555180642 Q611 -L620 0.0916756268743293 L620 -A627 0.0877838591004929 L617 -R626 0.085952943113716 S608 -L634 0.084385974070555 L607 -A639 0.0837959303410205 V615 -L630 0.0772105578001474 S608 -D638 0.0748445404525118 L607 -P633 0.0743694792813834 V615 -L634 0.0743396455702189 R614 -D638 0.0735803066883904 S608 -D631 0.0734758496021679 V615 -R623 0.0717133381550683 G609 -S641 0.0707873968012493 R623 -L628 0.069331499996806 A618 -L628 0.0662404329406645 V616 -I629 0.0652086976280648 R614 -A639 0.0648570083876329 G610 -G619 0.0644716294182912 G609 -A639 0.0636874356542347 V616 -L628 0.0607325965014951 R614 -R623 0.0604385630175992 Q606 -V615 0.057990097026333 S608 -V616 0.0578966721418306 G609 -L617 0.0549171264431735 V616 -G636 0.0520174332282017 R614 -L634 0.0515036371093167 L621 -A627 0.0494811255940486 A622 -L630 0.0482196009017493 L634 -A639 0.0454308449120819 S608 -G636 0.0421495970167052 L617 -A627 0.0414158045686879 L621 -L630 0.0408805373329493 G609 -L630 0.0396900146543337 L607 -A635 0.0357887506508558 V615 -P633 0.0349668999789952 A622 -L628 0.0331133721585313 G610 -S641 0.0328297123389945 V616 -L637 0.0276916054721683 S608 -E632 0.027077915836057 R613 -A618 0.0240784996165164 G610 -L620 0.0234584537359233 L617 -A635 0.0217234091048608 V616 -P625 0.017024121783583 V615 -L637 0.016824098793105 S608 -R613 0.0158427669816144 V616 -P633 0.0157449934936658 M612 -G619 0.0149719858874429 L620 -L628 0.0145878329220466 R613 -L637 0.0144432208744973 V616 -A635 0.00851486219763231 L620 -P633 0.00377853133612316 L617 -R623 0.0036955018079059 I629 -L634 0.00309275692387434 Q611 -L630 0.00305670010971593 R613 -G619 0.00303417147874541 Q611 -V616 0.00236041219201644 V616 -E632 0.00143441355403828 L617 -G636 -0.000664554085777702 A624 -I629 -0.000970980546940226 V616 -L630 -0.00161307390205856 A618 -R623 -0.00191994706943954 G619 -P633 -0.00318882824170785 G609 -D631 -0.00369878201671758 M612 -D638 -0.00588883517445993 L607 -D638 -0.00680574896970221 L620 -D631 -0.00797259351388169 P633 -A640 -0.0116816667209667 G609 -A618 -0.0124995900752856 G610 -L630 -0.0134110589548437 V615 -A635 -0.0143758326630656 G610 -A618 -0.0152328998257181 Q606 -G636 -0.0167037953783042 R614 -E632 -0.0169143179333515 Q611 -A618 -0.0171744237394824 G619 -L630 -0.0173785618794602 G610 -A639 -0.0195867176562117 V615 -A624 -0.0210230941497711 L617 -A624 -0.0218191392645668 R613 -L621 -0.0247350017559977 R613 -I629 -0.0261576733031803 A622 -A627 -0.0273681213184207 G619 -P625 -0.0281964547546902 A635 -S641 -0.031272478939163 G609 -G636 -0.0348596241850259 A618 -L630 -0.0364906367338529 A618 -P633 -0.0376946295926328 R614 -G619 -0.0392940585094388 L607 -R613 -0.0396832537539904 A618 -R626 -0.0421784886402055 L607 -L617 -0.0441319331640173 A618 -P625 -0.0467089100946472 Q611 -D631 -0.0503084065823334 M612 -L637 -0.0511522087248357 R623 -L630 -0.0555010415069127 Q611 -A640 -0.0558675851877943 E632 -L637 -0.0562369638117204 G609 -L634 -0.0569092328905398 A624 -L630 -0.0569493795674472 L620 -R626 -0.061548803862717 Q611 -A635 -0.0637452309830986 L607 -L637 -0.0713716329401937 Q611 -D638 -0.0740792173651263 M612 -L621 -0.0747150999618427 R614 -S641 -0.0813929848911417 R614 -L630 -0.0814870894225823 L617 -E632 -0.0818853675902478 E632 -S641 -0.0853939571839395 V615 -A622 -0.0892921784816565 L621 -I629 -0.0929704499972792 R613 -D631 -0.0942534808725022 S608 -R614 -0.0982429423118625 L621 -P633 -0.0985221832670202 A618 -E632 -0.100735572694683 V616 -L634 -0.105086232566621 M612 -L634 -0.105706766818701 G619 -I629 -0.106114396372548 R613 -S641 -0.107787990398612 M612 -L620 -0.108605249371895 M612 -D631 -0.109898992649303 G619 -A624 -0.111309116716319 G609 -D638 -0.11265313081871 M612 -G636 -0.115636614424703 L617 -L628 -0.120678753563848 D631 -G636 -0.12087641235091 G610 -L617 -0.121734058452173 V616 -R626 -0.124457711808052 L628 -P633 -0.125897421811447 L607 -G636 -0.132540712149868 L620 -I629 -0.138050642440599 M612 -E632 -0.140561940013845 A618 -D631 -0.143535565859749 A618 -I629 -0.145256974592954 L617 -L634 -0.145322234702308 G609 -V616 -0.146900873268821 V616 -R623 -0.151503794096445 M612 -P633 -0.153572203667154 L617 -I629 -0.154913662170626 G609 -L637 -0.15522326224484 L621 -D631 -0.157683978479966 D631 -L637 -0.158728407220617 L634 -A640 -0.160230879582853 A618 -L634 -0.162993114845617 R613 -L628 -0.163765705119037 R623 -I629 -0.163767499680968 S608 -L617 -0.172601532742251 R614 -A635 -0.173142644597997 R614 -L621 -0.181485802840982 L621 -R626 -0.182341899601563 A635 -A640 -0.182394026045235 R614 -I629 -0.183683993939594 R613 -A622 -0.184086935592233 L620 -L630 -0.188403077921581 S608 -L637 -0.188498468770465 A618 -A624 -0.188781615626193 V615 -E632 -0.189642345035741 L621 -L628 -0.192190758455617 G609 -V615 -0.193647330399094 G610 -V616 -0.202151793735502 R613 -G636 -0.204855924585595 S608 -A635 -0.208787708066197 L617 -P633 -0.21478777830937 V615 -D638 -0.2186081013196 P633 -S641 -0.224053614952611 G609 -P633 -0.225057816011708 R613 -A635 -0.225491463543866 R613 -L634 -0.226155207840992 G610 -E632 -0.226444226002612 L607 -V616 -0.234172144701499 Q611 -L634 -0.240424045129422 G610 -V615 -0.24249043866113 L617 -L630 -0.249997171589875 R614 -L620 -0.254768340228346 R613 -L630 -0.268015072596405 M612 -A618 -0.278607054924863 L607 -R614 -0.284435198358034 R613 -L620 -0.285449561493364 V616 -A622 -0.29704433014527 L617 -D631 -0.308458402688956 Q606 -Q611 -0.309599074656376 Q611 -P633 -0.33365901086988 S608 -V615 -0.335046657636574 Q606 -M612 -0.336220846501241 M612 -L617 -0.346871613216813 G610 -G636 -0.358494526083272 V616 -L621 -0.370791194358572 L607 -V615 -0.389271083957496 V615 -L621 -0.409760422409783 Q611 -L617 -0.418772263199953 G609 -A635 -0.423951402405004 V615 -L620 -0.433289344515268