[Fri Aug 26 16:37:34 2016] >Input file: TMA0A0H3MDU1M1D.pdb >TM segments: 240-274 MAIDEN score = 9.3712 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L254 -I263 10 H251 -R267 1.33886272710097 P256 -T261 1.29168721902944 H250 -N266 1.042357157114 V255 -I263 0.796827232278215 V255 -R264 0.631603764964938 I242 -A247 0.600774418619217 A252 -I263 0.529579278448902 L246 -N270 0.502744695354864 A252 -T272 0.496634486486474 A252 -D265 0.481225343750156 D265 -F273 0.475700380598581 A247 -N270 0.411564961732821 A252 -S268 0.31638128638444 V255 -D265 0.300164292398387 E244 -R249 0.28222539390112 T253 -D265 0.246870578889726 E262 -T272 0.239886961571873 A247 -I269 0.238499455754023 V245 -I269 0.226793463224237 L254 -T272 0.216024263116906 A247 -R267 0.212210075877527 P243 -H250 0.201628689479587 P243 -H251 0.200723524743163 H251 -R264 0.195557212792572 H250 -R267 0.194106441701117 A252 -T261 0.190216153090725 D265 -N270 0.189837073267938 L254 -D265 0.18641093993599 H250 -T272 0.184918397322093 D265 -V274 0.181023804637185 I242 -T272 0.179636541188261 P243 -S268 0.178824247528534 A252 -I269 0.173014222327257 L254 -T261 0.170456682416268 A247 -S268 0.168499573986766 I242 -R249 0.165575696997333 I242 -A252 0.163642399201783 A247 -T253 0.161589019624869 R249 -N270 0.152519401407137 H251 -T272 0.151168584340606 I263 -V274 0.147891282697115 R264 -N270 0.147353278500377 H250 -G271 0.14226887389088 I240 -I263 0.133044032337565 E262 -V274 0.128687296039655 E262 -F273 0.128172572784878 A247 -D265 0.127879670325397 I242 -T253 0.127052901217141 D265 -T272 0.125205606876009 E244 -I269 0.124691124094336 T253 -G271 0.124295019912414 T253 -S268 0.122680168740164 A252 -R267 0.1132333011709 E244 -S268 0.104899230221957 V241 -T272 0.100132296066992 V255 -T272 0.0993724939431084 R264 -G271 0.0988596945657694 E244 -H251 0.0983347564727676 I242 -S248 0.0975378538963003 V241 -T253 0.0973230504971179 T253 -N266 0.0958848429096313 V245 -H250 0.0947441941291203 T253 -F273 0.0875810865984972 V241 -L254 0.0862207667492219 A247 -N266 0.0839845286513707 I242 -L254 0.0784060044424457 V245 -G271 0.0743446664144531 R249 -R264 0.0681848976737074 V245 -N270 0.0680286030483126 R267 -F273 0.0675799733336899 T257 -R264 0.0654826763972022 V245 -S268 0.0648856921528012 P256 -R264 0.0639194333724504 L246 -R267 0.062778535475466 V241 -H250 0.0541079518090806 T253 -R267 0.0525820293058077 V255 -E262 0.0517635408181887 S248 -I269 0.0469116336138709 R249 -R267 0.0462296395434709 H251 -E262 0.0447750676975813 R249 -G271 0.0422783046816013 D265 -G271 0.0374193892321202 P256 -E262 0.0331372397219458 S248 -N270 0.0330397871137578 H250 -S268 0.0327662578852168 L246 -A252 0.0327306372022084 L254 -G259 0.0312182769436138 H250 -N270 0.0259109311586805 I242 -I269 0.0254664229151729 L254 -F273 0.0251861443538801 L254 -R264 0.024283009224479 I263 -G271 0.0232126624071531 I240 -T272 0.0203649501138461 H250 -I263 0.0202008716049169 T253 -I269 0.0172377984390439 T261 -V274 0.0155682793248602 R249 -T272 0.0155226725418935 R249 -D265 0.0109637580271069 N266 -F273 0.00815908195806792 A247 -R264 0.00794584391320718 R249 -S268 0.00771790245412918 E262 -G271 0.00525523515358817 S248 -T253 0.00395925452159496 E244 -G271 0.00383498249286673 L246 -I269 0.00272234674519467 I240 -A247 0.00248619962312734 T253 -V274 0.0014292549030519 V245 -H251 -0.00155779307927628 I240 -V255 -0.00167048940915526 V241 -L246 -0.002495364407606 A252 -V274 -0.00660444172217733 E244 -N270 -0.00800592726285987 I240 -V245 -0.0118997837860757 H251 -N270 -0.0153887527620622 V241 -S268 -0.0213501082973329 S248 -I263 -0.0277738185942722 V241 -R249 -0.0280744833783846 I242 -D265 -0.0304552196792172 R264 -V274 -0.030725374949502 S248 -D265 -0.0314196146013854 I242 -N270 -0.0354974505824615 A252 -N270 -0.0370207382572758 P256 -D265 -0.037067284015454 I240 -R249 -0.0420161091590336 L254 -V274 -0.0445119228773354 V255 -G260 -0.0487201821154866 R264 -I269 -0.0536136730075185 I240 -D265 -0.0565554962766265 I240 -S248 -0.0623001360830648 T253 -G260 -0.0626683115679574 E244 -A252 -0.065689302062347 P243 -A252 -0.0660267842430282 I242 -S268 -0.0698250758749488 S248 -R264 -0.0704271724961923 I263 -S268 -0.0719650994381662 T253 -N270 -0.0735474031218217 S248 -F273 -0.074149965063514 S268 -V274 -0.0747072404620639 V255 -N266 -0.0764755086930347 L254 -G271 -0.0778635003365595 R264 -T272 -0.0798377393438798 H250 -D265 -0.0805657121893606 A247 -F273 -0.0897242702856751 P256 -I263 -0.0920610600788936 I263 -N270 -0.0935455292080176 N266 -T272 -0.0964735671747354 L246 -G271 -0.0972580939714547 V241 -N266 -0.0978065562028236 L246 -N266 -0.0999855717858971 A252 -F273 -0.101458370678028 T253 -T261 -0.10255667269348 I242 -G271 -0.104184983638795 N266 -V274 -0.104926491285224 V241 -A252 -0.105269202031211 S248 -R267 -0.107250721475434 V255 -T261 -0.109124395945073 R267 -T272 -0.116001391162241 L246 -F273 -0.121724833161321 L246 -T272 -0.121818575138135 T257 -E262 -0.121837194693883 T257 -I263 -0.122320429668592 R264 -F273 -0.123129802721497 V241 -A247 -0.123458442841886 P243 -N270 -0.124997246982621 T253 -I263 -0.126213963275887 S248 -G271 -0.128966825983317 P258 -I263 -0.131940523088547 A247 -G271 -0.132895475412102 L254 -R267 -0.134652189421776 H251 -F273 -0.136418057933609 E244 -H250 -0.143137615205423 L254 -G260 -0.143426014138727 I240 -R264 -0.144011672892936 R249 -I269 -0.148122174109487 L254 -N266 -0.151571631654057 I263 -T272 -0.158226534904073 T253 -T272 -0.159976746336882 T253 -E262 -0.160047777962265 I240 -N266 -0.160436542773468 H251 -G271 -0.16595334920408 N266 -G271 -0.167324401252696 E244 -T272 -0.176497384599442 L246 -H251 -0.178363872883409 L246 -D265 -0.179481573163087 R249 -N266 -0.185161067595872 S268 -F273 -0.185412388273353 S248 -T272 -0.186232495315317 L254 -S268 -0.18937262356095 S248 -N266 -0.19380875895573 A247 -T272 -0.215211631894225 H251 -V274 -0.219381647758278 H250 -R264 -0.225302733593395 A252 -E262 -0.228743148259418 I240 -T253 -0.233134869772293 P243 -S248 -0.234166901166316 H251 -I269 -0.239945661173711 A247 -A252 -0.246689245263244 V241 -S248 -0.253036390241122 I263 -F273 -0.25935931878796 H250 -V255 -0.260820131827388 V241 -H251 -0.26412628596622 I242 -H251 -0.280367376569775 I240 -L254 -0.284793033617391 H251 -N266 -0.289738923828526 A252 -N266 -0.292810513959878 L246 -S268 -0.323594569467856 I240 -A252 -0.331569438208788 H251 -I263 -0.353327326967435 H250 -I269 -0.355656336097359 A252 -G271 -0.368937349568411 L254 -E262 -0.405767431235418 S248 -S268 -0.413096076529194 P243 -R249 -0.4367274252875 I240 -H251 -0.46985520578473 I240 -H250 -0.507526364514993 I242 -H250 -0.52287347633136 T253 -R264 -0.552606738829468 H251 -S268 -0.617101387081739 A252 -R264 -0.704044208035695 H251 -D265 -0.840739098469732