[Mon Aug 29 16:49:17 2016] >Input file: TMA0A0H3MDU1S2G.pdb >TM segments: A492-527 MAIDEN score = -5.6165 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T510A-Y515A 1.2589473750094 H511A-L516A 0.808639806449361 H511A-D517A 0.63084381661155 R497A-V518A 0.470013071310674 M493A-C519A 0.453476629181748 R504A-C519A 0.418839664257534 L499A-V505A 0.407595804141359 L499A-V506A 0.406595204781519 L516A-V522A 0.399914954688778 T510A-L516A 0.380807818485208 V492A-R497A 0.369729181461323 M493A-V522A 0.336433635386711 A500A-V506A 0.309416503209897 M493A-Y515A 0.305618561696767 H511A-C519A 0.28682879468582 V509A-D517A 0.281648723516209 V492A-D517A 0.275972896370593 V505A-D520A 0.266846612066087 L496A-V506A 0.261534049460198 D501A-V518A 0.259120726844936 M495A-V505A 0.214356186610797 T494A-C519A 0.213170208036086 M495A-R504A 0.206132747134024 V509A-L516A 0.206058392863807 M493A-V509A 0.205748550144591 L507A-V522A 0.190037247777489 R497A-V506A 0.184566931494689 M493A-V518A 0.173346206298596 V509A-V518A 0.165266423201843 L496A-D501A 0.161803786701178 T510A-Q521A 0.160135442654465 T494A-D517A 0.158768577295361 H511A-V518A 0.157229603077036 M495A-L507A 0.152399959344427 T510A-L523A 0.146831156775466 M495A-D517A 0.141001691759705 V492A-A500A 0.140949324473091 M495A-V508A 0.14044008810894 Y515A-D520A 0.138695617495904 L516A-Q521A 0.129943713877849 R497A-D520A 0.12042847717998 S512A-V522A 0.118729827277959 T494A-D501A 0.112353586593641 S512A-C519A 0.111343704281498 R504A-Q521A 0.109285249241889 A500A-V508A 0.108362885909777 L496A-G503A 0.108286618555296 L499A-V518A 0.103645103734578 L496A-D520A 0.103116237305854 L499A-V508A 0.103045009881799 A500A-Q521A 0.103041333338854 H511A-A526A 0.101291743620603 H511A-L525A 0.100952440421605 V506A-L523A 0.100726867180691 T510A-V518A 0.0992143710507665 Q498A-L507A 0.0978995101270717 V492A-S512A 0.0953619728120172 L496A-V509A 0.0946221070332613 L496A-Q521A 0.0945199938947161 R497A-Q521A 0.0936396275749436 V492A-L507A 0.0896193821091256 L496A-V518A 0.0892512312564371 Y515A-V522A 0.0874682370872505 M493A-L513A 0.0873096489618783 V518A-L523A 0.0827653048453172 V508A-L525A 0.0799090079358185 L507A-L513A 0.078466804384548 V492A-L513A 0.0753960786151301 T510A-L525A 0.0646935651853617 L513A-L524A 0.0636251800859697 R497A-C519A 0.063496431997919 T494A-A502A 0.0634285752543926 Q498A-C519A 0.0630464774973305 L516A-L525A 0.0626409123087743 L499A-L507A 0.0622182811966718 M493A-T510A 0.0602978281693961 A500A-D520A 0.0589744225215458 R497A-V508A 0.0584525459340726 R497A-T514A 0.0559007312877717 A500A-L516A 0.0557969609845994 R497A-L507A 0.0539491423404117 R497A-R504A 0.0531658436373021 M493A-V505A 0.0425202639300943 L507A-Y515A 0.0420356148755667 M493A-L516A 0.0391427952350467 A500A-C519A 0.0376388330560102 M495A-A502A 0.0373284488861634 V505A-V522A 0.0351011592934416 H511A-L523A 0.0327915454516367 L513A-L523A 0.031799429893109 V506A-C519A 0.0292937542033613 T514A-Q521A 0.0260693206698057 M495A-T514A 0.0254883579595826 V518A-L524A 0.0237026941897749 T494A-L516A 0.0232735353968323 V509A-T514A 0.022599448159784 T510A-D520A 0.0213395584819178 R497A-D517A 0.0156486624750107 V492A-T510A 0.0151612554529583 A500A-V518A 0.010818710596217 L496A-T510A 0.0105352654009487 V508A-L516A 0.00813891755640128 L496A-L516A 0.00797588335328925 G503A-Q521A 0.00726822708059816 L496A-D517A 0.00642217174395232 M495A-D501A 0.00380778149553995 V505A-V518A 0.00356102184886886 D501A-V506A 0.0025724929912414 H511A-V522A 0.00235634821835351 T514A-V522A 0.00178044679065903 V508A-C519A 0.000909590800407756 V506A-V522A -0.000362751724005683 T494A-L507A -0.00135874588542184 Q498A-V518A -0.00242639661338195 D517A-L523A -0.00413500721763738 V508A-V518A -0.00436229122881215 T494A-L513A -0.00493496801897964 T494A-V518A -0.00684647223751522 V509A-Q521A -0.0091979493093155 L513A-Q521A -0.00949504436938042 T510A-A526A -0.0121071291393555 M495A-A500A -0.0164569110849291 V509A-A526A -0.018053390997355 V508A-T514A -0.0215394051702367 Q498A-V505A -0.0216573164930232 T494A-V505A -0.0234227474446325 M493A-T514A -0.0239797014057106 Q498A-V508A -0.0256357137958194 R497A-Y515A -0.0256726969391128 V492A-C519A -0.0321150024143666 V505A-Q521A -0.0339713861084396 T494A-S512A -0.0359446087101585 Y515A-Q521A -0.0395279782533776 T494A-D520A -0.0433850839570091 V492A-V509A -0.0435481186036406 G503A-C519A -0.0449082058763857 D501A-Q521A -0.0456391285178559 A500A-V522A -0.0470905548773359 V506A-V518A -0.0476484789899798 M495A-L516A -0.0485565761455975 L507A-L524A -0.0498096470948752 T494A-R504A -0.05088926144564 T510A-D517A -0.0529913027735791 Q498A-R504A -0.0546248046819482 L499A-R504A -0.0554923238434855 T494A-V506A -0.0576485467494288 M495A-V518A -0.059134964222012 V508A-D520A -0.0607910646538468 D517A-L524A -0.0638528695805074 L496A-V505A -0.0675867426278671 L496A-T514A -0.0690480734620702 G503A-D520A -0.0691521111469111 L507A-S512A -0.0695043568411782 M495A-G503A -0.0710566051457278 Q498A-Y515A -0.0718789674695526 V509A-D520A -0.0750290826211009 T494A-Y515A -0.0771798553818546 L507A-C519A -0.0788787830941313 V506A-Y515A -0.0792575922419665 T510A-C519A -0.0793449253949046 L499A-Y515A -0.0837086762231714 V509A-C519A -0.0839781638697499 L499A-D520A -0.0848913491344893 L507A-D517A -0.0851342432228389 L513A-D520A -0.0858392602966297 R504A-D520A -0.0874594389609513 T494A-V508A -0.0887348665431542 V492A-V506A -0.0901640513726625 Q498A-D520A -0.0921412092785038 M495A-V506A -0.0932628146619767 T494A-T514A -0.0935109234653435 R497A-V522A -0.0941506820376903 M493A-S512A -0.0942970792016832 T494A-A500A -0.0956300119682321 S512A-L524A -0.0966212730959244 M493A-Q521A -0.0982291806036379 V508A-D517A -0.0994517462837505 V508A-Q521A -0.0999492447370791 L507A-L516A -0.100170561226552 V492A-V508A -0.104634020071837 M493A-D520A -0.105001779337661 A500A-Y515A -0.105111711227313 M493A-A500A -0.105402767975129 S512A-D517A -0.105995775818401 M495A-Y515A -0.106505669130136 V492A-H511A -0.107174464594504 V508A-V522A -0.107780367525177 C519A-L524A -0.108812866270045 T514A-D520A -0.109872732454043 D501A-C519A -0.110033650724862 V505A-L523A -0.110978030162882 L496A-S512A -0.11104023023332 V508A-Y515A -0.112430593684922 M493A-L507A -0.115979384641157 L513A-V522A -0.121699747790351 Y515A-L523A -0.127810962977328 R497A-L516A -0.129198556227099 M493A-H511A -0.129864073080748 R497A-A502A -0.131805047484649 D501A-L507A -0.136131112212026 A500A-V505A -0.139301461836219 M493A-D501A -0.14313290426113 V508A-L524A -0.145247527305346 V505A-C519A -0.152317903119806 L516A-L524A -0.152492642304587 V509A-L523A -0.153554552441584 S512A-L523A -0.156403382034178 R497A-V505A -0.159285156889763 L499A-C519A -0.162515836572714 D501A-D520A -0.162911042654823 L507A-L525A -0.165427057747924 M493A-V506A -0.165481955197319 V508A-L523A -0.166381803571288 V506A-D520A -0.167746926039941 H511A-L524A -0.172752183024909 L496A-R504A -0.175089544061353 Q498A-V506A -0.180110192668063 V492A-V518A -0.183608777136244 R497A-G503A -0.187331751985136 T494A-L499A -0.188535547380006 L507A-V518A -0.189787180272689 Y515A-L524A -0.190061852466936 V506A-D517A -0.190133259913685 M493A-V508A -0.190290767449535 L516A-L523A -0.19206280048182 L507A-D520A -0.202609490810565 M495A-C519A -0.205078893443036 V509A-L525A -0.205238207405369 M493A-D517A -0.208107502165801 V506A-L516A -0.212789472083637 V508A-L513A -0.222301345627277 L507A-Q521A -0.223077882520879 M493A-R504A -0.2234018215916 V492A-L516A -0.232287869163514 V492A-Y515A -0.235062363274947 D517A-V522A -0.237235292463633 L496A-Y515A -0.239334009044685 L496A-A502A -0.23956148836176 A500A-L507A -0.24692730419742 V492A-T514A -0.251561092432429 T510A-V522A -0.252444298222334 V492A-D501A -0.269107134843318 V506A-Q521A -0.283151674282627 T510A-L524A -0.283950298768541 H511A-P527A -0.286716796261373 L513A-V518A -0.28987950022003 Q498A-G503A -0.292107608952874 V492A-L499A -0.296038074914944 V509A-L524A -0.29744093236949 S512A-V518A -0.326069642241877 V509A-V522A -0.33165661843365 L496A-V508A -0.336014442904786 V509A-Y515A -0.363982887040029 M493A-Q498A -0.37734896952416 L496A-L507A -0.390999823376648 M493A-L499A -0.392220008798608 L507A-L523A -0.448239516497676 T514A-C519A -0.45024651934301 V492A-Q498A -0.456498709127037 L496A-C519A -0.460886888011461 H511A-Q521A -0.540730763437292 L513A-C519A -0.549057494439508