[Mon Aug 29 16:49:37 2016] >Input file: TMA0A0H3MDU1S4G.pdb >TM segments: A332-342_A348-367_A454-489 MAIDEN score = -10.0949 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q458A-L484A 1.04416358741207 E467A-L475A 0.741272060585726 K460A-L484A 0.719856264432402 I351A-K358A 0.678065320862145 L335A-L361A 0.639499114598777 R461A-P480A 0.528543325867654 R461A-L484A 0.482440991202035 R461A-L466A 0.429682995083758 A342A-T348A 0.412609155471674 L334A-T360A 0.370286567618239 L335A-T360A 0.367011606338438 S359A-P480A 0.366770770898034 T481A-D489A 0.362882814683008 A362A-D478A 0.352743542316542 G352A-K358A 0.349011680966969 K460A-E479A 0.336017916902595 K332A-A356A 0.331577233159808 G457A-T481A 0.324198296741057 G456A-L484A 0.314669551520378 L334A-A356A 0.290647524176007 E467A-P480A 0.285992373076206 Q458A-P480A 0.276295799054721 G355A-L361A 0.274582679358045 K460A-G483A 0.266851219093446 K460A-T481A 0.257955023481887 R461A-E467A 0.249709242439838 V365A-D478A 0.249194444543586 P353A-S359A 0.243028130010213 S359A-A366A 0.242482122164349 T348A-L474A 0.241799205113963 D478A-D489A 0.239282250587397 L334A-G357A 0.234866564435177 A362A-I476A 0.218728225435587 A366A-S473A 0.216369678822074 Q458A-P486A 0.214690831477774 G337A-L361A 0.214064769696268 D336A-A356A 0.204870935675826 G352A-S359A 0.20238488746892 T333A-G355A 0.195042386277462 S339A-K358A 0.194645920053319 S359A-S482A 0.193259396585086 D336A-T360A 0.190305552954689 S455A-L484A 0.186224674512615 L335A-G357A 0.185425089102543 G456A-D485A 0.184313185291665 V464A-P480A 0.184050159722135 E467A-L477A 0.182555308201509 R459A-D478A 0.178896026967738 G456A-S463A 0.178121606328235 S455A-L488A 0.175305925577851 T333A-L361A 0.170411726263159 T333A-K358A 0.167593784696363 P353A-K358A 0.16350542646211 T348A-D478A 0.163164461495244 R363A-I476A 0.157469035979961 V464A-D478A 0.157099646839312 G457A-A487A 0.157091984920725 A465A-T481A 0.151842377373866 G457A-D485A 0.147838466727362 K332A-T360A 0.145479374702236 G456A-P486A 0.143924559687508 V350A-S359A 0.139114239088945 A462A-E467A 0.135165329292879 S463A-L475A 0.134669916312482 V365A-I476A 0.133572816598819 L364A-L474A 0.133351399894465 L335A-K358A 0.131406432953006 A349A-S359A 0.129870211514718 G352A-T360A 0.128491143681041 G456A-E479A 0.127955264838338 L340A-K358A 0.126435358810926 V350A-K358A 0.123099373057567 R461A-A487A 0.122935340665863 T481A-L488A 0.12202667104843 V350A-P480A 0.122013771789359 L469A-L474A 0.120536498326793 L364A-L475A 0.12016018601122 G456A-P480A 0.119372831839765 L340A-V350A 0.11833734805347 L364A-L477A 0.117385931944857 P480A-P486A 0.116425756237685 S463A-L468A 0.116253331250157 L475A-P480A 0.115906647073387 G355A-A362A 0.114975039203042 S482A-L488A 0.113864215272938 G357A-R363A 0.113253447216719 P480A-D485A 0.113143112032424 G367A-I476A 0.112817149019053 G357A-V365A 0.112350803179165 S339A-L361A 0.112027022553478 A462A-S482A 0.109101361068109 R461A-L488A 0.109075881047211 S339A-A362A 0.108291970949947 P480A-L488A 0.10824859787806 L468A-P480A 0.105748050978312 A349A-S354A 0.105684605346165 A342A-S473A 0.105438087379693 A349A-P480A 0.10476002940998 A349A-G357A 0.104683541974309 L466A-L474A 0.104232711572015 E467A-D478A 0.104154656946067 V464A-S482A 0.104042431316508 S455A-T481A 0.103956049748477 S339A-A349A 0.103737087263488 R461A-D485A 0.103245642920373 V350A-L475A 0.10189733393671 T348A-A362A 0.10165222428049 G457A-P486A 0.0981736479549127 L335A-V350A 0.0945493028193984 I351A-T360A 0.0942955026494889 P480A-A487A 0.0935688283357123 K332A-G357A 0.0928630003790776 L340A-L364A 0.0927623719495054 E467A-P472A 0.0913611436694093 L334A-L364A 0.0906026178992529 T333A-A356A 0.0904364361310601 I338A-V350A 0.0901715654378954 G337A-A356A 0.0887785667040539 D336A-K358A 0.0877501480017879 S463A-G483A 0.087308503636804 S354A-T360A 0.0868943288635671 T470A-I476A 0.0867955820355198 R459A-L488A 0.0861369933643805 S339A-T348A 0.0857769619505265 S463A-D478A 0.0849911254908986 T348A-S359A 0.0849448738191954 G337A-A362A 0.0830578974002805 S354A-S482A 0.0825026030740936 A342A-L364A 0.0824140140777132 T341A-A362A 0.082102837582517 T481A-A487A 0.0815398606118061 D336A-G357A 0.0794762461941412 G337A-G357A 0.0791807396399093 S455A-D485A 0.0790435480082747 G457A-A465A 0.0786978522403663 L334A-G355A 0.0777671049849443 A342A-A362A 0.0762545829231565 A356A-A362A 0.0758077447619367 I338A-A349A 0.0749767093248135 G352A-L361A 0.0748692971370648 R459A-S482A 0.0748256097421544 L335A-V365A 0.0745798978301709 S482A-A487A 0.0745459640521098 V350A-T360A 0.0738211309717887 L454A-G483A 0.0735839864959056 S339A-G357A 0.0729360814074491 G457A-E479A 0.0720133360769468 R461A-P486A 0.0707969744712948 L334A-S354A 0.070270690216272 V365A-S473A 0.0701903916724125 G456A-A487A 0.0685068764417514 E467A-L474A 0.0683853794131279 E467A-E479A 0.0683059978854957 A462A-L488A 0.0665073749091656 A462A-L477A 0.0654674357373901 K460A-P480A 0.0654633372975297 G456A-A465A 0.0640051505289887 L454A-A465A 0.0638270160343026 A349A-L474A 0.0636999550442174 G456A-R461A 0.0635708850934429 A462A-G471A 0.0620006083773978 S354A-S359A 0.0616238269026621 G471A-I476A 0.0597911957803581 L469A-L477A 0.0585425528549743 S463A-L484A 0.0575859074097758 R363A-L474A 0.0568668622844406 S354A-D478A 0.0567488585014684 A366A-L477A 0.0548203710826121 R459A-L466A 0.054724552541455 G352A-E479A 0.0538253185921829 T333A-S359A 0.0526969250385667 A366A-P472A 0.0504616969890606 A349A-L475A 0.0501588416862822 I338A-T360A 0.0493100695031874 A462A-T470A 0.0491952947124403 L477A-G483A 0.0484461212282854 A465A-L474A 0.0482196009017493 K358A-E479A 0.0471397175156412 A465A-I476A 0.0468937126918121 Q458A-A465A 0.0464187122559874 G337A-L364A 0.0459544360838358 L334A-G352A 0.0426800494954702 G456A-L488A 0.0422270123584227 S463A-G471A 0.042177156095309 G357A-E479A 0.0416495809644566 T360A-I476A 0.0413692299367643 V464A-D489A 0.0412612479335008 I338A-T348A 0.0398977549112898 L335A-R363A 0.0393174068097841 K332A-G337A 0.0392865232359703 A342A-L361A 0.0392501148783682 S359A-G367A 0.0381964693564938 T341A-L361A 0.0360558825238866 V350A-R363A 0.0359913365404186 L454A-S463A 0.0358573315498509 G457A-S482A 0.0348960775727676 L469A-L475A 0.0341146726106576 V464A-E479A 0.0324676247647986 T348A-R363A 0.0323286749734731 R461A-E479A 0.0315527980601118 A362A-L474A 0.0297511477798724 Q458A-G483A 0.0275073017909442 K358A-V365A 0.0262087033106573 A356A-D478A 0.0257607353739499 L468A-L474A 0.0255120425073017 K460A-S482A 0.0236455107160589 I338A-V365A 0.0222079290225299 G355A-E479A 0.0215660226916021 R461A-I476A 0.0215474559560863 A349A-V365A 0.020624069928167 R461A-S482A 0.0203205453002746 L335A-G367A 0.0195842710260838 G457A-L484A 0.019376800459195 S463A-T470A 0.019278056845347 L340A-A349A 0.0187226638450904 S455A-D489A 0.0184779196627898 I351A-I476A 0.0173934069470478 L454A-V464A 0.0160856284458948 S354A-L361A 0.0159882111166034 S463A-D489A 0.0156898980625997 T341A-V365A 0.0139410989430671 R459A-V464A 0.013383300796197 A349A-T481A 0.0132064991065739 K332A-G355A 0.011839710887586 A342A-V350A 0.0117920646157268 R459A-D489A 0.0117543080249245 T481A-P486A 0.011276727740559 A349A-K358A 0.0107754160210836 G352A-A362A 0.0103223520681763 I351A-T481A 0.00962247763098478 T360A-G367A 0.00908208425243151 D336A-S359A 0.00898075884666066 G457A-L466A 0.00783608970930905 V464A-L474A 0.00782396198955215 R459A-T481A 0.00779673220502364 A362A-P480A 0.00670526558745732 I351A-A362A 0.00662593328109928 K460A-L468A 0.00598651307292197 V464A-L488A 0.00526072164851499 G337A-K358A 0.00330573426414293 I338A-A362A 0.00313388985736958 K358A-D478A 0.00283301528986746 Q458A-E467A 0.00214539805161329 A462A-D489A 0.00204389184851239 G357A-D478A 0.000690916219033721 G457A-L477A 0.000428998447270401 A349A-A356A 6.76096572860274e-06 I351A-D478A 4.42523453125787e-06 L340A-T360A -0.000496444113276207 L454A-S482A -0.000916916678569583 G367A-L474A -0.000932415187989477 T333A-L364A -0.00142448062023171 G456A-V464A -0.00173262528953222 S339A-V350A -0.00229110943185873 I338A-L361A -0.00230528654715556 S463A-P472A -0.00408722739792822 L466A-L475A -0.00598155056449068 A349A-L477A -0.00796180980373018 T341A-V350A -0.00810104691151164 V464A-P472A -0.00964045487465603 K460A-I476A -0.00966024187328207 I338A-A356A -0.00967461783890622 L466A-T481A -0.0107770749344285 A362A-L477A -0.0109252736970651 S359A-E479A -0.0122421468960534 A465A-P480A -0.0127109293955412 L454A-L484A -0.0130345564556791 A342A-V365A -0.0132483034367969 S339A-V365A -0.0135052630835619 T341A-L364A -0.0136935519130894 A366A-T470A -0.0137576027013169 L466A-P480A -0.0143663159907614 Q458A-E479A -0.0175141668130456 T470A-L477A -0.0185420710969257 G457A-D478A -0.0189336202476107 A465A-P472A -0.0192228837423123 S463A-I476A -0.0200668867422475 L364A-D478A -0.020108842239646 G357A-L477A -0.0210634549049047 S339A-T360A -0.0212664278658985 S359A-T481A -0.022694932323577 V365A-L477A -0.0247199702212271 L335A-G352A -0.0248783230950176 L454A-K460A -0.0258713027604029 S463A-S482A -0.0272608332905775 A366A-D478A -0.0276594421617928 A342A-I476A -0.0280886862070444 A462A-G483A -0.0283352824434275 T348A-S473A -0.0288844532290293 S455A-S482A -0.029513355295876 A366A-E467A -0.0303364238948126 Q458A-A487A -0.0311934487772234 T341A-A349A -0.0319305678031423 I476A-T481A -0.0329194312394128 G471A-L477A -0.0339510024846771 R461A-T470A -0.0343497921572486 L475A-T481A -0.0361743409965234 S455A-P480A -0.0372454835749849 V350A-V365A -0.0382310931153218 A362A-E479A -0.0390790423070322 P472A-L477A -0.0395327428312235 Q458A-D489A -0.0399095379347485 L340A-L361A -0.0402243197250218 T348A-P480A -0.0403601177364239 G355A-D478A -0.0417000741543347 A349A-T360A -0.0421711364449699 A342A-L474A -0.0432471206697409 V350A-A362A -0.0441675383397673 A349A-R363A -0.0448491946700962 V464A-T481A -0.0450736948891626 Q458A-L466A -0.046402037259166 K332A-L361A -0.0470593265209391 R363A-L475A -0.0475394474363098 A349A-A362A -0.0479590783487502 S463A-E479A -0.0480584695611745 R459A-G483A -0.0493226072145876 E479A-D489A -0.0494285664845016 V464A-G483A -0.0495704707892415 A462A-E479A -0.0502889847396797 V350A-G355A -0.0522008744023257 Q458A-D485A -0.0524554621201627 A465A-L475A -0.0526707834227356 S455A-S463A -0.0533637512585092 A462A-T481A -0.0541916090852039 T348A-V365A -0.0551435159788376 E467A-I476A -0.0553874141648985 L334A-P353A -0.0554222425558133 K358A-A366A -0.0561397079016857 A356A-E479A -0.0568849334338095 T348A-K358A -0.05703317899673 A342A-L475A -0.0574657037643522 L334A-A362A -0.05794481169877 P353A-D478A -0.0584442861003584 G355A-T360A -0.0591235508108736 L335A-S354A -0.0596620118702206 L335A-L340A -0.059694338371532 L364A-I476A -0.0598636542986082 K358A-L475A -0.0606605508182283 V365A-P472A -0.061180939540868 R461A-L469A -0.0612316315400818 K460A-L469A -0.0623981612290523 R459A-P480A -0.0630313852426383 I476A-S482A -0.0630613483797071 A462A-L484A -0.0631365900358265 L340A-V365A -0.063707123808987 S455A-V464A -0.0649940929296879 A465A-L488A -0.0652434988020376 T360A-A366A -0.0653121311258307 S359A-L475A -0.0658218737251062 D336A-L364A -0.0663058272292414 S354A-A362A -0.0664260761974287 A465A-E479A -0.0666382033954362 V350A-S482A -0.0683359584123808 V464A-S473A -0.0683359584123808 G337A-T360A -0.0705011645553077 A356A-L364A -0.0715511069093413 S354A-E479A -0.0716364068650324 A356A-L361A -0.071696831561356 E467A-S473A -0.0727433516490827 L466A-S473A -0.0727828803247288 T360A-L477A -0.0732396557907826 L469A-I476A -0.0755037442662889 T360A-V365A -0.0771072183887984 L468A-S473A -0.0775990560586912 L335A-G355A -0.0795913690042838 T348A-L361A -0.0800807280464007 I351A-S482A -0.0801932010377302 S455A-K460A -0.0809174324452115 K460A-D485A -0.0815505302147712 G357A-I476A -0.0824331994267609 A356A-R363A -0.084314405103656 A465A-L477A -0.0847630964919981 L361A-I476A -0.0853884386487042 L477A-D489A -0.0857348630359633 L477A-S482A -0.085811127523284 S463A-P480A -0.0859786061338805 D478A-L484A -0.0866823323056131 G352A-D478A -0.087253359251882 I338A-G352A -0.0878408138832669 S455A-R461A -0.0879815357011334 L361A-D478A -0.0886264127383614 L340A-G357A -0.0897764503362417 G367A-L475A -0.0901960784788196 D478A-G483A -0.0916203431018272 R461A-G483A -0.0920063844700043 I338A-L364A -0.0934149408365237 V365A-L475A -0.09349322249453 I351A-L361A -0.0936387085488555 L468A-I476A -0.0951535409423387 A366A-I476A -0.0957289964889263 I338A-K358A -0.0957949169211281 P353A-T360A -0.0968060997047839 L340A-A362A -0.097353610986894 T341A-L474A -0.0990088992781414 P353A-L361A -0.0992713419022611 E479A-D485A -0.0998182477134359 L335A-A356A -0.100083234076871 A349A-L361A -0.100284612818829 S482A-D489A -0.100700126969129 S339A-L364A -0.101299933850434 I338A-S359A -0.102555117696233 L340A-I351A -0.102949840614682 V350A-L364A -0.103418852435343 L335A-I351A -0.10506351396095 K358A-I476A -0.107408740988711 L334A-R363A -0.108329848508509 R363A-P480A -0.109484387563449 I351A-L477A -0.11001756570841 R461A-L468A -0.110300470240104 A362A-G367A -0.111723914207634 G456A-D489A -0.111744393156371 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