[Mon Aug 29 16:50:56 2016] >Input file: TMA0A0H3MF01S1G.pdb >TM segments: B252-259_B261-269_B272-280 MAIDEN score = 15.1111 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A255B-D266B 10 W257B-F263B 1.03990990660313 I253B-M268B 1.02053769242827 R265B-A273B 1.01299406174631 H254B-V267B 0.984347887737165 F256B-V267B 0.875130717934673 V258B-F263B 0.795740572181993 D266B-A273B 0.677833874925874 P259B-K264B 0.498122819869883 R265B-N274B 0.476785297204302 I253B-V267B 0.464259679773431 V258B-K264B 0.457193331157011 M268B-A273B 0.445469256638948 W257B-L262B 0.396208912820914 A255B-K264B 0.350517817584489 L262B-V277B 0.30055370651045 V252B-P269B 0.268981428024851 V267B-V272B 0.260972510862012 I253B-P269B 0.241206239701295 L262B-S276B 0.224014750927298 H254B-R265B 0.210680117251885 F261B-V279B 0.179960698256264 H254B-V272B 0.176297173260202 D266B-N275B 0.16403996138384 V252B-M268B 0.160500695602217 L262B-N275B 0.158567946951735 F263B-N278B 0.154025629894317 R265B-N275B 0.151429536990567 P259B-R265B 0.13178145731378 K264B-N275B 0.12678730384421 L262B-A273B 0.11217477772989 V267B-A273B 0.111788071797722 A255B-P269B 0.111611458045115 W257B-N274B 0.108095152177691 A255B-N274B 0.0945869985266774 V258B-S276B 0.0934231363383802 V267B-N275B 0.0878594096786309 F256B-F261B 0.0855930612891869 A255B-F261B 0.082643411660448 R265B-V277B 0.0701258995906409 F263B-A273B 0.0669698804618291 V252B-V272B 0.0641630044813706 D266B-N274B 0.0590493584747986 I253B-V272B 0.055785010765411 F256B-R265B 0.0520579474727426 A255B-N275B 0.050297287675239 L262B-F280B 0.0481236864383789 R265B-S276B 0.0475625629732004 W257B-S276B 0.0458272616587134 V258B-N275B 0.045602539476413 H254B-A273B 0.0447742441397523 V252B-A273B 0.033610246984491 L262B-N274B 0.0330056991608689 D266B-S276B 0.0313650656694602 F261B-N275B 0.0311611239610434 P259B-S276B 0.0294714091084582 P259B-V277B 0.0267101786350754 K264B-S276B 0.0264071645715102 I253B-A273B 0.0260443983797978 F261B-N278B 0.0252118283596809 K264B-V277B 0.0243319256357562 F261B-N274B 0.0204334080712014 K264B-N274B 0.0159616131869025 I253B-K264B 0.0134049272201762 F256B-K264B 0.0109587583659199 F256B-S276B 0.00971275462453369 F256B-V272B 0.0073541308122157 I253B-D266B 0.00724592380421107 F256B-P269B 0.00390413511120613 F256B-V277B 0.00274733294173668 A255B-V272B 0.0019174381024829 F263B-N274B -0.00586962075580066 V258B-V267B -0.00634403155882213 F261B-V277B -0.00657693998993558 F263B-N275B -0.0171690063076801 V258B-N274B -0.0188281021732857 W257B-M268B -0.0256560555840641 W257B-A273B -0.025733123918672 A255B-L262B -0.0257901980092452 V267B-S276B -0.0261579267642844 P259B-N275B -0.0299300754579646 W257B-N275B -0.0444097898072461 V258B-V277B -0.0462053697672582 P259B-D266B -0.0468867778547275 H254B-P269B -0.0482491207980135 P269B-N274B -0.0563697361150401 M268B-N275B -0.0633128184022391 A255B-F263B -0.0657409766090601 F256B-N274B -0.0671723815030723 F256B-N275B -0.0688475888499366 W257B-R265B -0.0719858272029157 W257B-K264B -0.0734426247008571 F263B-S276B -0.0789185902588936 V267B-N274B -0.0842672261547102 L262B-V279B -0.099986320364458 W257B-V277B -0.102397007642494 H254B-N274B -0.102682746531522 V258B-N278B -0.105145787838402 V252B-D266B -0.124362205691246 V258B-D266B -0.125147023330042 H254B-M268B -0.129459417328085 F261B-F280B -0.131787333698551 W257B-D266B -0.136881107643548 F261B-S276B -0.145918767846159 V252B-V267B -0.147342468385647 I253B-N274B -0.149809167203586 D266B-V272B -0.151413259866239 L262B-N278B -0.157431116269916 R265B-V272B -0.162575073152448 V258B-R265B -0.172061060001062 K264B-V272B -0.175767200450234 F256B-A273B -0.180104344738337 M268B-N274B -0.190103927177463 A255B-M268B -0.190654422695757 A255B-A273B -0.191175901110533 A255B-V267B -0.195207943845286 H254B-F263B -0.215117854992704 V252B-R265B -0.215930376166201 F256B-M268B -0.220063407971161 H254B-N275B -0.228910369300989 H254B-K264B -0.24212140031211 H254B-D266B -0.253883095184719 F256B-L262B -0.280141785775208 F263B-V277B -0.344807506823729 K264B-A273B -0.360112326719571 W257B-V267B -0.386437251526562 I253B-R265B -0.41328069423065 F256B-F263B -0.440547104382666 F256B-D266B -0.635063231530635 A255B-R265B -0.705087192165386