[Fri Aug 26 16:49:22 2016] >Input file: TMA0A0H3P2B4M1D.pdb >TM segments: 186-204_ 209-215 MAIDEN score = -1.5319 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E196 -T204 0.415071425536623 S194 -G200 0.298349405754278 E196 -R202 0.267218231906193 R199 -T204 0.179897215288115 D193 -R199 0.156838459930755 W198 -H203 0.154192193338341 D193 -M201 0.152688973465368 M201 -Y212 0.138469035257158 A192 -R199 0.128071388258731 G200 -V209 0.113857860586767 A188 -S194 0.112155591845287 T197 -Y212 0.0922813854921021 D193 -W198 0.0672888328932211 L189 -T197 0.0614083849779741 A191 -E196 0.0589679583138301 R199 -V209 0.0561369610888107 I186 -A191 0.0538422749799237 I186 -A192 0.0324988310317211 T197 -V209 0.0302651235676586 A191 -T197 0.0223538554592109 L189 -G200 0.020129571017244 V190 -E196 0.0173402538863427 A192 -T197 0.0123963484191396 A188 -D193 0.00683316425362968 P187 -D193 0.00454245126983133 M201 -A210 -0.00492914603190298 S194 -R199 -0.0298821409440428 W198 -Y212 -0.034928676272746 R195 -T204 -0.0386275432490222 V209 -V214 -0.0424013812991726 I186 -D193 -0.0492689306265539 D193 -G200 -0.0521031018715772 L189 -R195 -0.0521480015998597 M201 -A211 -0.0550741492515257 A192 -G200 -0.0608573004206167 R195 -R202 -0.0673669875297767 W198 -A211 -0.0680838251551945 A188 -E196 -0.071891234945118 T204 -V209 -0.0752718789765341 H203 -V209 -0.0864696368838258 W198 -A210 -0.086534288036892 R195 -G200 -0.0924522423761703 R202 -A210 -0.0936120323849354 T197 -H203 -0.0982343730561117 R195 -M201 -0.106731478594331 S194 -R202 -0.10816072427312 V190 -R195 -0.109591217866183 A192 -W198 -0.119001342569198 E196 -H203 -0.119592813023546 R195 -V209 -0.122113516762063 L189 -S194 -0.12645173356472 P187 -A192 -0.141090007858974 L189 -E196 -0.149635016996469 R202 -V209 -0.163179585940194 S194 -M201 -0.180678259065511 R195 -H203 -0.181976573353069 T197 -R202 -0.197369056270913 W198 -V209 -0.202029594696622 E196 -M201 -0.207329062818404 M201 -V209 -0.229632295386774 W198 -T204 -0.267010914786622 T197 -T204 -0.293245007630443