[Fri Aug 26 16:58:51 2016] >Input file: TMA0A0H3P4X7M1D.pdb >TM segments: 92-136 MAIDEN score = -9.9462 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W95 -L101 1.02627837286308 W95 -A102 0.59377387071309 V96 -L101 0.529142943439335 A98 -V109 0.410912000716452 A102 -L108 0.409902687103421 I92 -V97 0.332821883705483 V109 -Y115 0.311904508408668 G93 -W100 0.296944079178593 A99 -G111 0.287358792005667 A94 -L101 0.282146735612181 G93 -A99 0.265283041499453 W95 -T110 0.249506960681525 G93 -T110 0.212180876992131 A128 -A135 0.211962567242786 W95 -I105 0.210337835828546 G127 -L134 0.193942694752227 A94 -T110 0.191331579406567 T110 -D116 0.185843944175969 L101 -G111 0.179487872548837 A94 -A99 0.178761268483045 G123 -I129 0.175391440401548 G111 -I117 0.170793367613993 L101 -T110 0.150757372375227 L108 -G113 0.147951156584534 G111 -A118 0.147037562083572 I129 -A135 0.138112279957284 G93 -G103 0.132978723577133 G111 -D116 0.131956995925954 A128 -Q136 0.127131804795056 G103 -P112 0.124929404592674 G93 -G111 0.124790800262588 W100 -L108 0.123157351854007 A102 -V109 0.121211944050714 G93 -I104 0.119275138484282 G127 -A135 0.106148726014641 I105 -G111 0.10597498967187 V97 -I105 0.0982860248783233 G103 -G113 0.0969237024151448 L119 -V126 0.0951337920550479 A98 -N107 0.0906404598170965 N107 -P112 0.0890501327976256 R120 -A128 0.0862461221687028 V126 -R133 0.0853919458555743 A102 -G113 0.0788021953741236 R120 -V126 0.0766694097066087 V96 -L108 0.075257189709094 L131 -Q136 0.074847271887645 G93 -V109 0.0732136360077447 G111 -L119 0.0714007180359122 V96 -T110 0.0673634104638432 V96 -A102 0.0660922959682821 A118 -A128 0.0620949522507077 F122 -L131 0.0584386808216095 L125 -R133 0.056696720098274 A94 -V109 0.0539335096817748 A118 -I129 0.0491501112037662 A99 -I105 0.0489849520685814 L101 -L108 0.048956926620967 A98 -G113 0.042796010545743 A94 -I104 0.0421027340226163 A98 -L106 0.0417747111899371 Y115 -G123 0.0412687683759021 A130 -Q136 0.0383032046293201 V96 -I105 0.0365033435953697 G93 -A98 0.0298485465231586 A99 -L108 0.0246364890890729 I104 -G111 0.0209053353570132 V97 -G111 0.0180293341225113 G123 -A130 0.0168141409997168 V97 -L106 0.0157860991151129 A94 -W100 0.0157286256477846 L108 -F114 0.00956770060005319 R120 -L125 0.00717046544371946 D116 -F122 0.00563274867490193 G113 -R120 0.00471052269306549 F114 -R120 0.00465129071328552 L106 -G111 -0.000331809373945724 A99 -G113 -0.00270382074625086 D121 -G127 -0.00816390717449883 F114 -F122 -0.00861754820349026 I129 -Q136 -0.00953972339499698 A99 -P112 -0.00980227751491558 G103 -G111 -0.0153586405894131 V126 -L134 -0.0162270171455887 G103 -V109 -0.0217532078649705 A99 -V109 -0.0224615227438063 A118 -V126 -0.0244680386231826 T110 -Y115 -0.0250254756172492 A98 -L108 -0.0303634463871951 T110 -A118 -0.0330681203449907 A98 -T110 -0.0366091066281475 A98 -Y115 -0.0366434594382652 V96 -G111 -0.0374322272185994 G113 -F122 -0.0385350085669272 A102 -P112 -0.0385440298564319 V97 -N107 -0.0386305949934691 A128 -R133 -0.0426977110731976 A98 -I104 -0.045180876392962 A99 -N107 -0.0453727910836936 T110 -I117 -0.0456798257163 F122 -A130 -0.0487974310601222 W100 -N107 -0.0494445088071398 L124 -R133 -0.0502908074504415 A102 -T110 -0.0508827490213699 G103 -L108 -0.0511873595834036 G123 -L131 -0.0589425764155544 A94 -I105 -0.0632703632083533 I92 -A98 -0.0636795773896335 G93 -I105 -0.0689976483496704 L108 -Y115 -0.0690571360131833 R120 -G127 -0.0700471398090086 P112 -L119 -0.0701927786466232 W95 -V109 -0.070517716685913 V97 -P112 -0.076257743658248 I92 -A99 -0.0773427928069275 V97 -G103 -0.0813265599450359 L124 -A132 -0.0825260561187049 V96 -L106 -0.0834940315033306 D116 -G123 -0.0839112167428344 A98 -D116 -0.0876411768618972 I104 -P112 -0.0891980510319197 I92 -A102 -0.0902592696991942 Y115 -R120 -0.0913942005992556 A94 -G103 -0.0920273882248073 L124 -L131 -0.0941635038232214 W100 -L106 -0.0960092348526196 I117 -L125 -0.0968902647809342 V96 -N107 -0.0992043629743775 I117 -L124 -0.100981891582877 P112 -R120 -0.102606999381458 V96 -V109 -0.103453256769506 W100 -G111 -0.104620599419965 F122 -G127 -0.10835723049622 I92 -G103 -0.109702754964475 G93 -L101 -0.10978765465242 L119 -A128 -0.112226641783437 I117 -F122 -0.11256111679473 V97 -V109 -0.112578856960969 D121 -A128 -0.11584279501828 A98 -P112 -0.11678571097983 A102 -G111 -0.11702413647563 V109 -F114 -0.11795494593474 G113 -D121 -0.121439506462283 I92 -L101 -0.126628139258034 D121 -V126 -0.134543486760523 I104 -T110 -0.136944157397183 W100 -I105 -0.139401444739228 W95 -L108 -0.141008530934813 A98 -G103 -0.141297597746098 D116 -D121 -0.141858355149535 Y115 -F122 -0.143695286107316 V96 -G103 -0.144230887073009 P112 -A118 -0.150483938097599 D121 -I129 -0.153560255937847 F114 -D121 -0.15744808209806 V96 -I104 -0.16115674782772 V97 -I104 -0.163407156143504 A99 -T110 -0.171219114453801 F122 -I129 -0.174516509224067 G113 -L119 -0.178355614882085 D116 -L124 -0.179281727552291 G93 -A102 -0.179443158764661 D116 -L125 -0.179969072923098 V97 -L108 -0.183734576981547 A94 -A102 -0.186284604620687 Y115 -D121 -0.186506129067155 F114 -L119 -0.189726526583004 A118 -L124 -0.192658686845577 G127 -R133 -0.195327443490548 A102 -N107 -0.204696083059833 V97 -T110 -0.205370130192347 L124 -A130 -0.205700159602206 I129 -L134 -0.214000811147281 A118 -G123 -0.216046859858498 G123 -A128 -0.222877276929753 I105 -T110 -0.225755217970576 V126 -A132 -0.230592896718099 A128 -L134 -0.232980082181312 L101 -N107 -0.233841508906979 A130 -A135 -0.234416149378008 A98 -G111 -0.254560516624257 W95 -G103 -0.260230171114877 G113 -A118 -0.270946259704925 L125 -A132 -0.27518946977711 W100 -T110 -0.27688186944496 V109 -D116 -0.27851815365519 P112 -I117 -0.28092380503951 A98 -I105 -0.281989544843994 F122 -A128 -0.281999463453818 A118 -L125 -0.292103265655052 I117 -G123 -0.298354835285921 L125 -A130 -0.303041418306601 G103 -T110 -0.312807140600134 W100 -V109 -0.313931366033612 V97 -A102 -0.346644292123788 I104 -V109 -0.353913321787907 I92 -W100 -0.356952817650814 W95 -I104 -0.357015519538046 L124 -I129 -0.357190113687691 L101 -V109 -0.385202024077903 L101 -L106 -0.3910250853415 L119 -L125 -0.393880543243274 L119 -L124 -0.399454493873426 G127 -A132 -0.429391704918883 L125 -L131 -0.435799510028918 V126 -L131 -0.460801365684681 A99 -I104 -0.473882727179515 W95 -W100 -0.4857656138537