[Mon Aug 29 17:09:07 2016] >Input file: TMA0A0H3P7M1M1G.pdb >TM segments: 204-234 MAIDEN score = 6.6150 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W204 -F210 0.911260970986474 V205 -F210 0.849701285805231 V205 -R212 0.846970182961644 L222 -V234 0.743933004907837 A228 -D233 0.707905158391634 F206 -R212 0.689737705872462 W204 -E209 0.626677203528515 P207 -R212 0.582082051061621 V205 -A211 0.536411278618261 T223 -D233 0.392156497285617 L222 -D233 0.349053035379027 G225 -E232 0.311772881442296 A224 -E229 0.262421063883366 L222 -V230 0.255052509174445 E229 -V234 0.203779117306523 F206 -N213 0.195714540912776 A224 -E232 0.15515880418868 F206 -A211 0.146418237613249 T223 -V230 0.135941546051239 N213 -E219 0.114850062601979 S220 -V234 0.110603433563791 A211 -A217 0.107335139362322 S220 -F231 0.1062474871702 P207 -P214 0.105791615189915 G225 -V230 0.0996572152220079 A224 -V230 0.0970858616150307 T223 -F231 0.0909943323552103 G226 -E232 0.0858665639031329 V205 -N213 0.0853339021608436 S220 -D233 0.081676703231327 A211 -L218 0.0795360601755455 R212 -L218 0.0777856577415778 F206 -D215 0.0673662850909456 I227 -D233 0.0529332074076909 E219 -V234 0.0453958213092482 T223 -V234 0.0452871606400099 T223 -E232 0.0442025379628488 G225 -F231 0.0431988298146644 A221 -A228 0.0378010620111136 S220 -V230 0.0347426249711313 F210 -A217 0.0260649057994939 A224 -D233 0.0139904197837701 V205 -P214 0.0134056698278338 L222 -E229 0.00802818046103404 G225 -V234 0.00379996659126647 L222 -A228 -0.00104709456775698 G226 -D233 -0.00888033039483427 L222 -E232 -0.0101197420619359 S220 -E232 -0.0101491814871772 A221 -F231 -0.0274287756343679 W204 -P214 -0.0358166714544783 A221 -E232 -0.042636647766447 W204 -R212 -0.0449977246558664 A221 -V234 -0.0460233797635894 W204 -N213 -0.0527086073125291 A211 -K216 -0.0737619647520145 E219 -V230 -0.0742826355737263 L222 -I227 -0.0756086086600103 A221 -V230 -0.0840500198137777 A221 -E229 -0.0911761215097715 I227 -V234 -0.0942212327752632 A224 -V234 -0.0958996961756244 T223 -E229 -0.0997105826650033 A224 -F231 -0.10200206507669 W204 -A211 -0.108618538238838 T223 -A228 -0.111144725389428 G226 -F231 -0.120937000213374 A221 -D233 -0.128797535371765 D208 -N213 -0.130524592933895 A228 -V234 -0.130926778444555 G225 -D233 -0.147646353124097 L218 -V234 -0.156739918283393 N213 -L218 -0.1759984814706 I227 -E232 -0.185800014251481 F206 -P214 -0.191004551200295 E219 -D233 -0.221285811632274 P207 -N213 -0.231443950630061 R212 -A217 -0.247383086598867 L222 -F231 -0.275074415177097 P214 -E219 -0.332268306954466