[Mon Aug 29 17:19:59 2016] >Input file: TMA0A0K1ZLM1M1G.pdb >TM segments: 52-68_ 99-121_ 157-172 MAIDEN score = -0.3856 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K163 -K169 0.842580480166532 E161 -V166 0.715921592163443 R60 -I66 0.569402073356255 L59 -R64 0.414271978885668 K163 -L170 0.331148378198797 H158 -K169 0.311852374351484 E161 -G171 0.310266147637937 H158 -K163 0.308589627656943 S57 -G63 0.291518727804873 W107 -T112 0.276376294073417 D159 -V166 0.264622359365039 S109 -P114 0.236261703070911 P58 -Y67 0.211943694506504 V100 -F105 0.201315629625058 R64 -D115 0.1775878586595 P58 -D65 0.177498090986857 D159 -M164 0.175083516534398 G52 -G63 0.171044344925992 S57 -A62 0.170405537597706 Y56 -G63 0.167046201282742 P104 -S109 0.162040933896224 E161 -R168 0.160229208092112 G108 -G113 0.152658130492501 H158 -L167 0.147974961925903 L59 -Y67 0.141006921263056 R64 -R118 0.140053819449673 R165 -G171 0.133393952896911 I53 -L59 0.119056784758716 P58 -G63 0.110541176603892 Y56 -A62 0.10627389941291 N157 -A162 0.0992268717155189 L59 -I68 0.0921709109197034 R60 -G120 0.0894245080622859 F101 -L106 0.0881286835970654 N157 -R168 0.0879224603914297 F101 -W107 0.0877131882896043 Y67 -G113 0.0855053375411075 E161 -L170 0.0854681655530583 V166 -G171 0.0845023514916097 R111 -L116 0.0785990910973269 G63 -G120 0.0751374578656548 N157 -L167 0.0658381358725677 I160 -L170 0.0633275954821753 P114 -G120 0.0633209929059584 Y67 -P114 0.0627473377649561 R60 -I68 0.0575019732016364 W107 -G113 0.0561944792750582 D159 -L167 0.0560591837017115 I160 -R168 0.0500722536523104 H158 -V166 0.0477193403229448 H103 -G108 0.0464108321927421 D159 -K169 0.0447595131219667 P58 -R64 0.0447033276240465 V166 -V172 0.0435061265658074 G63 -V119 0.0416322245535214 S99 -G108 0.0393011261618048 F105 -K110 0.0387626576434661 S109 -D115 0.0337599954755412 G52 -L59 0.0292945984352242 H158 -M164 0.0229762216337206 D115 -Q121 0.0212193326764858 G52 -R60 0.0195852878335883 A162 -V172 0.0145772703948741 A54 -G63 0.0116756477433211 P58 -I66 0.0114345528536246 I68 -L116 0.00440041446653794 P114 -V119 0.00323117565745168 D159 -R168 0.0024243740064771 D115 -G120 -0.00154248243873223 Y67 -L116 -0.00234512589658031 G113 -V119 -0.00467234386809823 A162 -L170 -0.00871507702853336 M164 -G171 -0.0169498607562462 G52 -P58 -0.0211879944664104 G108 -D115 -0.0226111972592719 A54 -R60 -0.0253372101425047 R64 -L116 -0.0289327699380628 G108 -P114 -0.0308256501081674 I160 -R165 -0.0310525606684924 D102 -W107 -0.031572206996557 G63 -L116 -0.032026301688756 Y67 -D115 -0.0395253329235963 T112 -A117 -0.0437450429000133 I160 -G171 -0.0466504914678256 I160 -K169 -0.0470282989188728 L106 -R111 -0.0492035642011835 F101 -G108 -0.0549922615186887 I68 -D115 -0.0582927694117326 N157 -R165 -0.0615131814375216 D102 -G108 -0.061680629160219 N157 -V166 -0.0630012041548338 Y67 -V119 -0.064290656823033 D159 -R165 -0.0643600892750211 L61 -Y67 -0.0709126223912939 F105 -D115 -0.0721479497268334 R60 -Y67 -0.0756352385694612 R60 -L116 -0.079697525269768 L59 -I66 -0.0815008590802719 L167 -V172 -0.0817752649336061 L61 -I68 -0.0830602484515144 H158 -R168 -0.0830697946599368 Y56 -L61 -0.0875583597113554 I66 -L116 -0.0908604536570126 Y67 -A117 -0.0923464929068682 N157 -K169 -0.0935205892024227 P55 -R60 -0.0937560951937466 I160 -L167 -0.0938435680678461 L61 -I66 -0.0964186502074398 M164 -V172 -0.0983571765074216 A162 -G171 -0.100451387181846 A162 -K169 -0.100766158943701 E161 -V172 -0.102319412971114 I53 -G63 -0.103627093201549 K110 -L116 -0.103839291029657 S99 -F105 -0.104858176984007 K163 -V172 -0.107170278749428 L106 -T112 -0.107227941929533 S57 -R64 -0.10723797598634 A54 -L59 -0.107913554579324 D159 -L170 -0.108349273615356 H158 -R165 -0.113485472409471 M164 -K169 -0.114203269091091 P114 -Q121 -0.114265054296177 V100 -W107 -0.117986543383203 S99 -W107 -0.119340593117968 K163 -R168 -0.120139072282811 S99 -P104 -0.122211996787364 R60 -D65 -0.125659996612509 E161 -L167 -0.126012169778199 K110 -D115 -0.128171276380666 R165 -V172 -0.132791650272629 E161 -K169 -0.133718943378996 D65 -L116 -0.14352662272155 R64 -G120 -0.14769804624967 G52 -S57 -0.148942479077642 R64 -A117 -0.170618369191609 N157 -K163 -0.170826872423379 G113 -R118 -0.170840788035411 A162 -L167 -0.181168219045116 N157 -M164 -0.19153112610212 M164 -L170 -0.196548330912227 L116 -Q121 -0.197312873643035 I160 -V166 -0.200294357184062 G63 -I68 -0.212975749519711 A162 -R168 -0.222943238088801 L59 -D65 -0.247565012790165 R60 -V119 -0.249512267688202 A62 -I68 -0.271354904893192 R64 -V119 -0.273274993311674 R165 -L170 -0.274773153144404 V100 -L106 -0.278289086930539 K163 -G171 -0.279247538174486 I53 -P58 -0.283739330896552 S99 -L106 -0.293710368762389 A62 -Y67 -0.31882194094221