[Mon Aug 29 17:20:39 2016] >Input file: TMA0A0K1ZSB9M1G.pdb >TM segments: 81-99_ 141-147 MAIDEN score = -0.6527 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H93 -Q98 0.890833652191011 L84 -C89 0.635271281608819 F85 -A90 0.603119173744205 A86 -A95 0.37431099936997 C92 -G99 0.365200047509686 C92 -F146 0.358739998313373 H93 -G141 0.28008869285983 A83 -A95 0.273669859819214 S87 -H93 0.248544735348358 G81 -C89 0.2450445854387 C89 -T145 0.239215696571084 R88 -M143 0.235046797076791 C89 -G141 0.215374167943017 C89 -Q98 0.206107254092076 R88 -H93 0.200973677255044 C92 -P144 0.197407348531484 G99 -G141 0.179894053266787 G99 -M143 0.179149728121956 A91 -G141 0.164750253435839 G81 -A96 0.161348527670495 A90 -G97 0.155030353160964 H93 -A142 0.144062313504795 G81 -A90 0.142588500425356 R88 -G97 0.131344938433697 S87 -P144 0.125745087965615 A142 -S147 0.123234240867608 A82 -A91 0.121057020322273 C89 -S147 0.118182947874048 R88 -T145 0.117269646560515 A82 -H93 0.116795429286414 A83 -C92 0.113628761847499 F85 -F146 0.11177240909431 L84 -A96 0.109468582870408 A86 -Q94 0.100656785078727 A82 -C92 0.100494034451994 C89 -P144 0.0999882242606502 A91 -F146 0.0966468090386403 L84 -Q94 0.0936359249528942 F85 -H93 0.0933274817618215 F85 -Q94 0.0929648017024949 F85 -G99 0.0917772821783518 R88 -G99 0.0823778261732053 G81 -A95 0.078181648292853 A91 -M143 0.0781553626614213 C89 -A96 0.0760729767718489 G81 -F146 0.0697858932027784 A86 -G99 0.0654741290649028 A82 -Q94 0.0642575257901878 A86 -G97 0.0615472416549201 F85 -A96 0.0541674971425543 A86 -A91 0.0530901804501527 R88 -A142 0.0500177790353074 A83 -G97 0.0494965163636221 F85 -M143 0.04838103951301 A83 -A91 0.0476264606905525 L84 -A95 0.0455975374532009 A91 -Q98 0.0454072448256551 F85 -A95 0.0403711663755733 L84 -C92 0.0396947484481283 C92 -G141 0.0394531556643019 C89 -A142 0.0389921495389447 A82 -A96 0.0380446545151454 L84 -S147 0.0380200124274683 C92 -M143 0.0372525811835445 L84 -G97 0.0332623508839482 C92 -A142 0.0324383539528563 G81 -G97 0.0194651166358824 A86 -C92 0.0165895002954475 G81 -H93 0.0162605620916974 R88 -P144 0.00925132130648043 L84 -H93 0.00905254757163482 A82 -G97 0.00861940972554898 S87 -F146 0.00755360857110277 L84 -P144 0.00585866262344581 F85 -P144 0.00078041139598739 A86 -Q98 -0.00457598677872817 L84 -A90 -0.00539068977021184 A91 -P144 -0.00558766450591186 S87 -T145 -0.0078898140315995 S87 -G97 -0.00818327016031528 A90 -M143 -0.00884169298003989 A83 -Q94 -0.0220661653860876 G81 -Q94 -0.0257408291960739 L84 -A91 -0.0270599799097884 A86 -H93 -0.0280535170330474 G81 -R88 -0.0280606036851987 C92 -T145 -0.0281848755328304 A83 -R88 -0.0288018963268951 H93 -F146 -0.0303269605966072 G99 -A142 -0.0438545416432374 S87 -G99 -0.045746292621671 F85 -S147 -0.0469611331556115 F85 -C92 -0.0487849156161351 F85 -T145 -0.0498834714275107 S87 -A96 -0.0538291236451531 A83 -H93 -0.0649729650622648 R88 -F146 -0.0662822010013586 A91 -A142 -0.0667834385124784 A90 -P144 -0.0700485916258458 C92 -Q98 -0.0708701976451014 A83 -A96 -0.0747865573377369 S87 -Q94 -0.0768210315812026 R88 -S147 -0.0792245085186025 Q94 -G99 -0.082486376582479 R88 -A95 -0.0875952993481466 Q94 -M143 -0.0893104756007235 A90 -F146 -0.0907377064046555 F85 -Q98 -0.102998251310904 A86 -A96 -0.104611992741063 L84 -T145 -0.107360083136942 F85 -G97 -0.107816026604564 A83 -F146 -0.107975424997703 F85 -A91 -0.109559069532479 H93 -T145 -0.111769745280212 A91 -G97 -0.125166427204172 R88 -Q94 -0.126402860139099 A82 -C89 -0.130029750796533 C89 -Q94 -0.130228678968681 G81 -S87 -0.149053838466355 A83 -C89 -0.155592782869078 L84 -F146 -0.157178836684149 A86 -F146 -0.161220813446065 A91 -A96 -0.187466930241839 R88 -A96 -0.189976497565163 C89 -A95 -0.192674282477063 C89 -G99 -0.197336561193813 S87 -A95 -0.202064393057009 H93 -M143 -0.205093759513747 C89 -M143 -0.212056441276571 A82 -A95 -0.222131401254825 A90 -Q98 -0.227364306204757 A83 -A90 -0.231911583321806 H93 -P144 -0.233560979920715 A82 -R88 -0.245049003952981 A82 -A90 -0.246975800539409 C92 -G97 -0.27670855602788 A90 -A96 -0.280922275630779 S87 -C92 -0.30596769644654 C89 -G97 -0.334930425936663 A90 -A95 -0.354489342330603 G81 -A86 -0.375055434995716 H93 -G99 -0.451724026090478 A91 -G99 -0.464320935887123 A90 -G99 -0.477781274077637 A82 -S87 -0.530373788070231 C89 -F146 -0.706425174622579