[Mon Aug 29 17:23:35 2016] >Input file: TMA0A0L0CXQ1M1G.pdb >TM segments: 43-51_ 56-73 MAIDEN score = 17.9998 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K48 -L60 10 T51 -V58 1.43789503741031 I46 -I62 1.39643247966876 V45 -I62 0.976530135973395 L44 -E69 0.968089012095732 T51 -L57 0.887531273828461 V45 -F72 0.747427084805431 L44 -F72 0.727986434519185 F49 -Y61 0.724033219185198 K48 -I62 0.703615191940527 V45 -L60 0.688664908636627 F49 -L60 0.658412898733231 D64 -E69 0.618831971261717 K48 -V58 0.617077919830492 F49 -V58 0.614154273148698 L44 -Y63 0.53028859488143 D66 -H73 0.515991180900887 K50 -L57 0.507899948743899 S47 -Y61 0.431184011498575 N68 -H73 0.392110430669351 T43 -E69 0.354151447087933 S47 -Y63 0.32797313627008 F49 -S59 0.296069638024117 V45 -Y63 0.287107350647396 S47 -I62 0.256328113285763 I46 -Y63 0.253587462752163 L60 -E69 0.251743915197552 V45 -V65 0.248201692359065 Y61 -H73 0.245444886189044 F49 -A56 0.221789448796351 T43 -H73 0.205602428135392 L44 -D64 0.193312184613647 I46 -L60 0.186403581452771 V65 -H73 0.178429763937104 K48 -D64 0.174596696001256 L60 -K70 0.170521694866289 T51 -S59 0.165676020930801 Y63 -H73 0.151558930810933 K48 -F72 0.150495382615084 D64 -N71 0.148552909012946 T43 -L60 0.127610371169729 T43 -K70 0.123762506334851 S47 -L60 0.120476820802939 L44 -K70 0.119118992758506 L44 -V67 0.114898780813283 V45 -E69 0.114348418103745 L60 -N71 0.113248717115682 K48 -E69 0.110329416966499 I46 -D64 0.108593316576371 S59 -N68 0.108280702263848 I62 -K70 0.108066174221649 S47 -V65 0.104531775107422 I46 -N68 0.0973532989560795 L60 -H73 0.0927989424858744 D64 -F72 0.0922499737609623 L57 -I62 0.0886206648566231 V45 -V58 0.088537629408556 D66 -F72 0.0847690931636755 Y61 -D66 0.0842579054834243 K48 -Y61 0.0837250442339847 I46 -S59 0.0816973848865779 S47 -N68 0.0752664125651696 V45 -N68 0.0743204394197019 I46 -N71 0.0730624783549849 S59 -H73 0.0724180214682539 V58 -Y63 0.0689099824001183 Y61 -N71 0.0606860353792107 S47 -N71 0.055115818093725 I62 -H73 0.0499266564196612 L44 -N68 0.0463918999516331 T51 -A56 0.039747225205506 S59 -F72 0.0384402189595767 Y61 -N68 0.0359029975328182 K48 -A56 0.035298005343531 I46 -V67 0.033866629816762 T43 -D66 0.033263083079365 S47 -D66 0.0311097062353096 L44 -N71 0.03038849866663 T43 -V65 0.0284891171234779 L60 -D66 0.0230366675960751 V65 -K70 0.0183652361621274 T43 -V67 0.0162808635773453 I62 -F72 0.0160032348459658 T43 -S59 0.0155433549703767 I46 -V58 0.0128753377135205 S47 -H73 0.0117684892832968 S59 -D64 0.00890652765298328 K50 -A56 0.00395478547422257 K50 -V58 -0.00171919782090413 I62 -N68 -0.00356785177578178 T43 -Y61 -0.00506821019548065 Y61 -K70 -0.00572902081267612 T43 -N71 -0.00779578858337526 I46 -H73 -0.00927608287883275 S47 -E69 -0.0211416137024392 I62 -N71 -0.0231243739748066 K48 -V65 -0.0251112128721136 F49 -I62 -0.029394953836273 K50 -S59 -0.0317713919036828 V67 -F72 -0.0459408128330505 V65 -F72 -0.0468829989492328 T43 -F49 -0.0471443990550497 Y63 -K70 -0.0495920392174378 S59 -E69 -0.0548679898047597 K48 -N68 -0.0555301757495537 L44 -D66 -0.0575729056257073 S47 -D64 -0.0645794588130044 S47 -F72 -0.0648587651346352 Y61 -V67 -0.0657894951052671 D66 -N71 -0.0699545978125031 T43 -N68 -0.0702529149828681 K48 -S59 -0.0749523653379096 V58 -E69 -0.0785053049993958 V45 -D66 -0.0815738681363891 L60 -N68 -0.0833473838853274 I46 -K70 -0.0856257484482854 Y63 -F72 -0.0857136265433736 K48 -H73 -0.0862051897804212 S47 -K70 -0.0913836687990845 S59 -K70 -0.0913836687990845 L44 -Y61 -0.0934870660735339 T43 -Y63 -0.0964776327820305 V45 -D64 -0.100517198876297 L44 -S59 -0.100980126016147 L60 -V67 -0.103065475542073 K50 -I62 -0.103095797873391 K50 -L60 -0.112547884766658 F49 -Y63 -0.114345885093664 T51 -Y61 -0.116141884828743 T43 -I62 -0.1202355135699 V45 -N71 -0.123319209669759 L44 -F49 -0.128867852859205 V58 -F72 -0.135205520316875 I46 -D66 -0.138986097308246 F49 -L57 -0.146778433720718 Y61 -F72 -0.148449231213715 D64 -K70 -0.157417283501958 K48 -Y63 -0.161969626354048 L44 -V65 -0.164303524124055 K50 -Y61 -0.170821436254395 K48 -L57 -0.172177257302279 S47 -L57 -0.174597374031437 T51 -L60 -0.175806627825564 T43 -K48 -0.178984572949658 T43 -D64 -0.181840049778439 I46 -E69 -0.197404273464687 I62 -E69 -0.197468105667743 V45 -K50 -0.199994910434727 V45 -K70 -0.202484628914906 Y61 -E69 -0.203583144630075 I46 -F72 -0.214736302177742 I46 -Y61 -0.218364441793668 I62 -V67 -0.21923839059462 L60 -V65 -0.233562153017708 T43 -F72 -0.242304839228071 D64 -H73 -0.251310346436875 V45 -Y61 -0.253630862330384 L60 -F72 -0.256882317066865 V58 -H73 -0.263600172939864 Y63 -N68 -0.26966200349073 V67 -H73 -0.287651118266794 V45 -H73 -0.32090616154519 V45 -S59 -0.330817914954317 V65 -N71 -0.334566217587208 S47 -V58 -0.335252388776326 L44 -I62 -0.34049630873081 V45 -V67 -0.352256606447928 L44 -H73 -0.401204190786588 L44 -L60 -0.407725961202043 I46 -V65 -0.466131716591565 Y63 -N71 -0.50178355062506 S47 -S59 -0.53648838509485 Y63 -E69 -0.713251948207001