[Mon Aug 29 17:26:17 2016] >Input file: TMA0A0M3GFC0M1G.pdb >TM segments: 273-307 MAIDEN score = -5.7189 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I281 -I287 1.1289174506693 I281 -R286 0.67583292853751 D277 -V294 0.323314089982372 L302 -G307 0.311162630746957 M292 -D299 0.275008558300049 D290 -V300 0.271412254260768 V275 -V289 0.265995098093155 G284 -D299 0.265586253414267 A280 -G291 0.25953275132328 N278 -G296 0.228866102291099 D290 -D301 0.221193222837995 P288 -L302 0.219533166000001 M292 -V300 0.212920918134852 A283 -D301 0.203361962340401 A274 -D290 0.197849159956647 A280 -E297 0.187456158859395 G284 -L302 0.178520436110069 G276 -V294 0.17348488015233 G276 -D290 0.172879791552885 A283 -G296 0.172821148774852 I279 -G291 0.166346229817965 A280 -S298 0.165697285951662 A282 -I293 0.14974373622009 I281 -V294 0.140887565327153 A274 -G291 0.134466741843452 A274 -A280 0.133585844749842 A282 -D299 0.132649273467296 R286 -G291 0.129161453288366 I273 -I281 0.125675657980342 N278 -S295 0.122154670583686 I287 -I293 0.116924876873447 G291 -V300 0.112694201047202 A282 -P288 0.107642746429659 N278 -D290 0.0992029420779268 V289 -V305 0.0962247730009276 Q285 -S298 0.095701770005677 I281 -L302 0.0917985978345357 Q285 -L302 0.0888820698185562 A274 -P288 0.0887851766662475 V300 -T306 0.0887633539120123 G284 -G296 0.0887172584156355 D277 -P288 0.0840395966292597 N278 -R286 0.0808386402755894 G276 -V289 0.0785279213100676 V289 -L302 0.0783968035609128 D290 -L302 0.0775449831483961 I279 -P288 0.0774860113702074 G276 -P288 0.0747830865347385 G284 -S303 0.0728286098469939 I293 -V300 0.0712429832458277 I273 -D290 0.0673435228083172 G291 -G296 0.0665002217980439 Q285 -S303 0.0632646538663297 D290 -S295 0.0599508601605641 G276 -I293 0.0593815473510924 G284 -D301 0.0584211843690579 M292 -L302 0.058031028331919 I287 -S303 0.0578206100105361 A282 -V300 0.0525793172927487 R286 -V305 0.0524055202827212 I273 -G291 0.0498418389374651 A283 -P288 0.049154601391419 I279 -G296 0.0476576616082616 D277 -S295 0.0425478896940549 I281 -M292 0.0410893181994427 A282 -S295 0.0396185409034286 V294 -V300 0.0396131777731341 I287 -V294 0.038175292875112 P288 -I293 0.0378828079450291 D277 -M292 0.0372726279520106 P288 -D301 0.0356246856904128 I281 -G291 0.030712797967579 P288 -V300 0.0288664894377251 N278 -V294 0.028269409734559 A274 -M292 0.0256345250108746 I279 -Q285 0.0249532633654099 N278 -I293 0.0248016272383644 I273 -A280 0.0242280036290348 V289 -V300 0.0237716037692923 D299 -T306 0.0225228772083748 I273 -N278 0.0212973317979048 G284 -E297 0.0162317461894188 I287 -G296 0.0157747449512815 I281 -P288 0.0153431295599056 R286 -S303 0.0126957192665307 G276 -S295 0.0115219067316441 D290 -V305 0.0105916207835559 A282 -D301 0.0100035378502279 I273 -V289 0.00521257901130845 N278 -I287 0.00498699038495598 A280 -M292 0.0041939531030053 Q285 -D299 0.00244465540955163 A283 -V300 -0.000474380688466391 P288 -V294 -0.00210071357556796 G291 -S298 -0.00640648322547488 V275 -V294 -0.00642159996103819 V300 -G307 -0.00765305573449293 A280 -V289 -0.00787587229443965 I279 -I293 -0.00874689642964022 R286 -D299 -0.0124831725556818 I287 -T306 -0.0164561876776523 V275 -I293 -0.0183779944197262 D290 -T306 -0.0201308000744542 V275 -A280 -0.0209346680028188 M292 -E297 -0.0233588469234749 Q285 -G296 -0.0233589334316761 I287 -S298 -0.0234061424669696 G291 -E297 -0.0240087877500179 I279 -V294 -0.026672557924055 Q285 -E297 -0.0289741509425978 I293 -D301 -0.0291711034706567 A280 -V300 -0.03199706300683 G284 -V300 -0.0353685343531938 G284 -S298 -0.0354913411536568 V289 -V294 -0.0357319580485529 A282 -V289 -0.0382449956008339 G276 -I287 -0.0411288617232761 P288 -V305 -0.0425022262275099 I287 -V300 -0.0453954032015407 A282 -V294 -0.0475141121122791 I287 -M292 -0.048185704300348 G291 -L302 -0.0492203305141459 I287 -E297 -0.0498689393265277 Q285 -D301 -0.050062038239876 V300 -V305 -0.0506767851079761 D299 -I304 -0.0513574359637248 I273 -I279 -0.0530372889752657 I279 -D290 -0.0552118244262756 D290 -I304 -0.0553278176899483 R286 -S298 -0.0570454855327904 D301 -T306 -0.0632558138531544 R286 -I304 -0.0653845412649541 A283 -S295 -0.0665455397685806 D277 -I287 -0.0669569182924332 I281 -D301 -0.0683425486129381 I279 -R286 -0.0722728470305087 A280 -D290 -0.0733591840228254 V275 -P288 -0.0756213923976064 I287 -V305 -0.0784737594723133 A283 -D299 -0.0802232352853904 I279 -G284 -0.0812927765456264 A280 -S295 -0.081936183131873 I287 -S295 -0.0821926015200162 I273 -P288 -0.0863237724986456 I281 -V300 -0.0866992454863453 R286 -V300 -0.0867623126152095 A280 -P288 -0.0888945472333459 Q285 -D290 -0.0892073395995718 I279 -S298 -0.089824680293145 A283 -S298 -0.0900507394315362 N278 -V289 -0.0942504954806562 N278 -G291 -0.094719007584581 V289 -I304 -0.0952993954597723 A274 -V289 -0.0976075197167536 A282 -G296 -0.0989767713284442 S295 -V300 -0.0993470477349265 P288 -I304 -0.105944803237067 G284 -I304 -0.10977708397077 D277 -I293 -0.109958086708543 A282 -E297 -0.11255330089277 I273 -M292 -0.113966211221324 V275 -D290 -0.114243323372878 Q285 -I304 -0.118791889253178 A283 -L302 -0.120137923958128 M292 -S298 -0.125592473085743 V275 -I287 -0.125884174262711 I279 -E297 -0.130642031311057 V275 -M292 -0.131724539079583 A280 -D299 -0.140223016405324 D277 -G291 -0.144265460756368 D301 -G307 -0.145072980566576 N278 -P288 -0.145146744018132 I287 -D301 -0.148387572316906 A274 -I287 -0.150144778641643 A283 -I293 -0.150402020333763 D277 -D290 -0.154005883281181 I281 -E297 -0.156749635179431 I287 -D299 -0.157159195731462 N278 -M292 -0.160105249540633 I279 -S295 -0.160973622958219 I273 -R286 -0.163379608341928 I293 -D299 -0.166282135337041 I281 -D299 -0.167049746386507 I281 -D290 -0.167209041145444 R286 -I293 -0.167223054182956 A280 -Q285 -0.169016286618001 I281 -S295 -0.170278657942088 G276 -M292 -0.182414311483132 R286 -L302 -0.194414881166018 I281 -S298 -0.195424297932429 I281 -V289 -0.196574160891531 I281 -I293 -0.198944233711516 A280 -G296 -0.215254067049427 R286 -D301 -0.219859465496304 I273 -I287 -0.220690537339032 I287 -I304 -0.221792955420902 A282 -S298 -0.227753071104322 A280 -R286 -0.236845052337958 A282 -I287 -0.241305720878874 V289 -D301 -0.241775954763864 V275 -G291 -0.246242681377888 V294 -D299 -0.247876825673091 I281 -G296 -0.265457375502347 I279 -I287 -0.276484056103688 G276 -G291 -0.281186299140755 D277 -V289 -0.287221571130327 A283 -E297 -0.298315062472095 R286 -M292 -0.311727848578111 I287 -L302 -0.329651237631825 A274 -I279 -0.336979978687912 I293 -S298 -0.340964883589083 A280 -I293 -0.344446565153316 A280 -V294 -0.363035152219263 I279 -M292 -0.402500205330007 A280 -I287 -0.45699411252503 Q285 -V300 -0.463008594543579 I279 -V289 -0.47253997034445