[Fri Aug 26 17:26:50 2016] >Input file: TMA0A0M4N6E7M1D.pdb >TM segments: 812-844 MAIDEN score = -8.8240 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E835 -F843 0.305975471497061 H839 -F844 0.305009124925089 K832 -L837 0.293417554642884 A817 -S825 0.275547182232287 N813 -E822 0.258379082513918 E822 -G829 0.238185966133074 L830 -E835 0.237511982061294 K832 -K838 0.23744673013346 L833 -K838 0.22061423268465 A831 -D836 0.201088537470575 G829 -D836 0.200054916430106 Q814 -E821 0.192255259321776 S820 -S825 0.186149135857137 N813 -S824 0.184592407888939 N826 -E835 0.130138883341746 N826 -A834 0.129477050080447 S816 -E821 0.129452982385695 D836 -V841 0.125687824493619 L830 -K838 0.122798136655535 S819 -N826 0.117205487848401 S820 -I828 0.115623874093686 S824 -K832 0.113557196878824 N813 -S819 0.113460071254933 L812 -S820 0.0983442491910684 S815 -E822 0.0966715336738873 S819 -S824 0.0899197795573006 A818 -N826 0.0867833073058231 A817 -E822 0.0818244287909855 A834 -V842 0.0672270102473949 S820 -S827 0.06498209151962 A818 -I828 0.0627650383161376 S825 -L833 0.062067037029891 N826 -K832 0.0569672362647156 S819 -S825 0.0545057710938224 E821 -G829 0.0539318310752072 S820 -G829 0.0504244429640837 S815 -L823 0.0470429981339116 E822 -L830 0.0434246096715474 S815 -S824 0.0428748171872146 A831 -H839 0.0343209384772398 Q814 -E822 0.0308471900879699 S816 -S825 0.0296648643341668 Q814 -S824 0.025860900550057 S825 -K832 0.0223325105312653 S827 -D836 0.0131371667320053 S816 -E822 0.00742609667632463 S815 -E821 0.00201692796262676 G829 -L837 0.00137637378170474 S825 -A834 0.00132741023128347 S820 -L830 -0.000806715402513081 E821 -S827 -0.010644212553531 A817 -S827 -0.0142373366626547 Q814 -L823 -0.0148472326052662 A834 -V841 -0.0149926897420842 A818 -S824 -0.015933759580931 A817 -N826 -0.0243108216398717 E822 -A831 -0.0322658325764489 Q814 -S820 -0.0326008310380101 A817 -S824 -0.0331798324841213 S819 -S827 -0.0395489135181299 N813 -E821 -0.0521926495991045 L823 -A831 -0.0546216161525801 E822 -S827 -0.0556499587333388 E835 -V842 -0.0566338492426208 K838 -F843 -0.0623005678227493 A817 -L823 -0.0635481637886466 S816 -S824 -0.0663437316247846 S827 -E835 -0.069266246207762 D836 -F844 -0.0698081924780518 G829 -K838 -0.0733802460636426 L833 -V841 -0.0800662482022148 S819 -I828 -0.082264749428663 A831 -E840 -0.0911354633518353 N813 -L823 -0.0964383550178756 E835 -E840 -0.0972969452924679 K832 -E840 -0.100015840607742 E821 -A831 -0.100735572694683 I828 -L837 -0.104217829161593 L812 -E821 -0.107184565697014 L833 -V842 -0.110832826362121 E821 -N826 -0.113268716255 L837 -F844 -0.115685953689558 N813 -S820 -0.118127825077343 A834 -F843 -0.1230262710286 A818 -S827 -0.126763255319042 L823 -L830 -0.131532085499546 G829 -E835 -0.136845692502015 N826 -L833 -0.137822639251204 Q814 -S819 -0.138363412995979 A834 -E840 -0.148531440153359 S827 -K832 -0.15452467642322 E821 -L830 -0.157779539106068 K838 -F844 -0.158033632061856 I828 -D836 -0.160507973392591 L812 -A818 -0.161299521563731 S820 -N826 -0.173349700938575 L823 -G829 -0.18088852396078 L823 -K832 -0.188514037664535 S824 -L833 -0.190498475986471 L830 -L837 -0.191021805945682 S827 -A834 -0.19503072692567 I828 -E835 -0.195470334590222 E822 -I828 -0.195917220474647 S825 -A831 -0.196811665137231 E821 -I828 -0.196975790555485 L833 -H839 -0.198033960221075 L812 -S819 -0.198415660271683 L830 -H839 -0.199254946342799 E835 -F844 -0.199452442638264 A818 -S825 -0.200559733262118 S824 -A831 -0.20249526401807 K832 -V841 -0.20657595023201 L812 -A817 -0.210586245518778 L833 -E840 -0.210946345156637 N813 -A818 -0.213325946713812 N826 -A831 -0.226402474811587 S824 -G829 -0.226453516714601 A818 -L823 -0.242255225763057 L837 -F843 -0.249879049124465 L830 -D836 -0.257355131579015 S815 -S820 -0.259797706137586 S825 -L830 -0.265318578604749 S816 -L823 -0.265804868523376 L823 -I828 -0.276024306162835 D836 -F843 -0.276235520881757 A831 -L837 -0.278196091089661 D836 -V842 -0.278534669123029 I828 -A834 -0.288403916740641 K832 -H839 -0.29100315902488 A831 -K838 -0.309320722653041 S827 -L833 -0.310216455481856 I828 -L833 -0.317122022396255 S824 -L830 -0.324661675727927 E835 -V841 -0.332786852544372 A834 -H839 -0.446868257165176 L837 -V842 -0.454631556339524 G829 -A834 -0.454930189759128