[Mon Aug 29 17:29:55 2016] >Input file: TMA0A0S4U9D1M1G.pdb >TM segments: 157-174 MAIDEN score = -2.1366 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A157 -A165 0.342279050734662 S161 -V167 0.164731604120882 Y159 -Q164 0.157027345501778 S161 -G168 0.150011959107648 T160 -A165 0.12671117700377 S161 -A170 0.105284730346253 Q164 -L169 0.0924136014127717 L169 -G174 0.0498940397362773 F158 -A170 0.0467436920589188 Y159 -V167 0.0395820140804802 T160 -G168 0.0386610087294748 A157 -V167 0.0330363672947094 I163 -G168 0.0298413062241316 W162 -V167 0.0269054417786152 A157 -A170 0.0266422061640008 F158 -S166 0.0138001763433206 A157 -L169 0.00860918330346827 T160 -S166 -0.00420064267887543 Y159 -G168 -0.0148258504046119 S161 -L169 -0.019567000528987 F158 -Q164 -0.0439866618039832 F158 -A165 -0.0606468214036763 F158 -I171 -0.0680287555156152 T160 -L169 -0.0984825931803615 W162 -L169 -0.104228120620892 A157 -W162 -0.106681222016783 Y159 -L169 -0.106818117431062 F158 -L169 -0.110050613092961 A157 -I171 -0.125866273871933 A157 -Q164 -0.143043896933543 W162 -G168 -0.16116398793135 F158 -V167 -0.182109083939944 Y159 -S166 -0.189830341615669 A157 -S166 -0.198431407684153 F158 -I163 -0.20768391872733 A157 -G168 -0.21325766670747 Y159 -A165 -0.216886319822743 F158 -G168 -0.265571443321702 T160 -V167 -0.269997932073858 A157 -I163 -0.318947037619458 S161 -S166 -0.35848636283623