[Mon Aug 29 17:36:40 2016] >Input file: TMA0A0T9PEL1M1G.pdb >TM segments: 377-391 MAIDEN score = 0.1216 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E386 -A391 0.925433966759743 F384 -L389 0.440139383417793 F384 -A391 0.202201542281072 G382 -A387 0.124350762446888 A383 -A390 0.0592034807549149 Q379 -F384 0.0545842123807674 G382 -L389 0.0398084216163284 G382 -K388 0.0258181926177046 G381 -E386 0.00525523515358817 G381 -L389 -0.0105509189082662 L378 -A383 -0.103584026814723 S377 -A383 -0.123872466429058 S377 -G382 -0.153992528179894 A383 -L389 -0.16237180883289 F384 -A390 -0.193680825554992 G385 -A391 -0.246479948060652 A383 -K388 -0.351300765711519 G385 -A390 -0.40938478845746