[Mon Aug 29 17:49:30 2016] >Input file: TMA0A101DEQ4M1G.pdb >TM segments: 73-105_ 131-148_ 168-182 MAIDEN score = -19.7534 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E142 -C147 0.945165485944379 R139 -V173 0.769481959488323 D135 -F180 0.539447868154746 M143 -M169 0.520012618163975 A146 -M169 0.5060436280075 D135 -F140 0.467224895980002 F98 -H103 0.446219194540678 A146 -L168 0.439831948557346 R139 -F172 0.438605570708319 R96 -G101 0.398951980705165 K132 -I137 0.390812212598038 E142 -F172 0.385260754572634 A146 -A171 0.37624667386351 R136 -I176 0.327865503018847 I176 -G181 0.316584900508194 K132 -R139 0.312589192094041 S95 -H103 0.305056050921782 E142 -L168 0.302488729138115 G138 -G174 0.295727587117392 R136 -E142 0.287228546833278 E133 -R139 0.286946052954954 R136 -M179 0.284833930247696 A177 -L182 0.275755295614914 R136 -M169 0.27438531831771 S131 -A177 0.259492500729777 R139 -M179 0.257568219082844 E133 -F141 0.249365225886978 G138 -L175 0.232353915678488 D135 -G181 0.215915162516843 S80 -G87 0.215485959281879 G138 -A177 0.215224291644843 L92 -E97 0.214220055344548 E97 -Y104 0.208532972146358 E133 -F180 0.196569314856034 M143 -L175 0.196427723598893 E134 -A177 0.187780855501962 D135 -R144 0.178363572529495 S131 -F180 0.173950059828989 N81 -Y89 0.171270330040813 C147 -M169 0.165763247948378 K132 -F140 0.165435200773425 M143 -G174 0.163371561204761 G174 -L182 0.163126376490569 S131 -R139 0.152215346011586 Y93 -Y104 0.152073426008508 R139 -A171 0.150926485215946 F85 -G91 0.146403393263395 I137 -I176 0.146039272893056 E134 -E142 0.144867114644382 L92 -Y104 0.144521477794834 P99 -Y104 0.142569216273237 Y93 -H103 0.139158086769413 G88 -Y93 0.138050876274654 Y93 -I105 0.131306482537143 G138 -M169 0.130620024946701 K132 -V173 0.127369735574467 E142 -G174 0.126966471981391 G145 -F172 0.124262501185516 P75 -T83 0.119698276031103 E134 -G181 0.116203877674305 G138 -A171 0.115916086634619 S95 -E100 0.114263659186182 A146 -V173 0.109405930852619 S95 -Y104 0.109361103711539 A84 -G91 0.105679029097694 L82 -L90 0.105110138601011 G91 -E97 0.104203261330313 A171 -F180 0.103516879385763 R136 -G174 0.100199953876158 F172 -G181 0.100116049649471 R139 -I176 0.0998974827695758 R136 -G181 0.0988452634317056 E133 -E142 0.0979584197880371 R139 -F180 0.0922512394418078 I94 -I105 0.0901688175563469 G138 -F172 0.0881343546902249 I137 -M169 0.0875319612124574 A171 -G181 0.0840548146575126 V77 -A86 0.0837908317392539 R136 -A177 0.0828948319460405 D135 -F172 0.0824182351583032 P75 -L82 0.0805734567320844 K132 -L182 0.0799779604970503 R139 -G145 0.0768193238378476 R144 -L168 0.0724203591842151 G138 -G181 0.0715032113941357 F85 -L90 0.0668578680099263 R136 -A146 0.0648570083876329 R136 -A171 0.0635919611104323 N81 -G88 0.0634511084846561 I137 -F180 0.0628013986706267 R139 -G178 0.0616000350601502 K132 -F180 0.0582600434554554 R136 -F141 0.0579080312105518 M143 -A171 0.0567186471289034 F85 -L92 0.0556230777402753 C147 -V173 0.054188083171093 E133 -G181 0.0530841144111718 S131 -R136 0.0529655588877733 G138 -G178 0.0521563451468867 A171 -G178 0.0506312905004958 Y89 -I94 0.0493574079263164 D135 -M169 0.0475934490414387 L175 -G181 0.0468388381157814 A171 -M179 0.0461825559622069 E142 -F170 0.0449533522847747 T83 -G91 0.0428514608836208 R139 -L168 0.0423705036668354 S131 -G178 0.0420490474404214 E133 -I176 0.0419091174637529 G138 -A146 0.0389693814428282 S80 -G88 0.0333772502081546 R96 -Y104 0.0328269206293192 R139 -R144 0.0287684329641638 D135 -I176 0.0244725849714205 E133 -M179 0.0242826996126615 E142 -M169 0.0241229655088233 L92 -P99 0.0235993221570752 L76 -N81 0.0234423329729428 R136 -F172 0.0234202194586953 D135 -L182 0.0191395300683579 M169 -A177 0.0148150570195797 G138 -L168 0.0123537628860584 G91 -R96 0.0123186600514911 K132 -G178 0.0114203594541789 L92 -H103 0.0111455247640997 A146 -F170 0.0109751157797824 R144 -V173 0.0107159143771414 E134 -V173 0.0106986190774676 D135 -A177 0.00947308306202155 T83 -L90 0.00694779938977419 G138 -M179 0.00582040868594502 G87 -L92 0.00503967705485353 D135 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-0.163180278553125 E142 -I176 -0.163931733118478 R136 -G178 -0.168631951450824 R139 -C147 -0.169358251467544 D135 -F141 -0.16954702313838 R136 -V173 -0.169826408160877 D135 -A171 -0.172448912280678 K132 -L175 -0.175347497020955 G145 -M169 -0.175555058837707 G145 -L168 -0.17604527146151 S131 -L175 -0.177335948166676 S131 -L182 -0.177971878954515 L78 -F85 -0.178388074847589 L168 -L175 -0.180214340606984 L90 -S95 -0.181494728500764 E97 -I105 -0.183783395225063 L74 -N81 -0.185909626268157 D135 -V173 -0.186823097663365 Y93 -F98 -0.188127470516371 S80 -A86 -0.193656776509113 A171 -A177 -0.193808671071734 E134 -I176 -0.194406346116744 I94 -E100 -0.195923760926186 I94 -Y104 -0.196423075823255 L74 -L82 -0.19824065282109 G138 -V173 -0.198651129550098 Y93 -E100 -0.203852349673495 F140 -F172 -0.204659518632404 E134 -F172 -0.206841582858016 V77 -T83 -0.20710148723953 I94 -G101 -0.213247533319627 R139 -L175 -0.213417498194759 F141 -F170 -0.214221784875585 G138 -C147 -0.217550298534809 V173 -G178 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-0.678589992062105 F141 -C147 -0.718559611583521