[Fri Aug 26 18:00:33 2016] >Input file: TMA0A101DZ16M1D.pdb >TM segments: 110-133_ 210-232 MAIDEN score = -8.4821 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L119 -S224 0.483987713281423 L122 -R127 0.432879581044419 L118 -S224 0.421088098114756 A211 -A218 0.347194519537715 L118 -V227 0.338486272880191 W226 -N231 0.338144561460302 M112 -V117 0.336708119903356 V117 -D221 0.275919935154997 V120 -D221 0.259310177553315 S213 -S222 0.220653554266057 V210 -L215 0.207529349491044 S213 -N220 0.202692659309948 N220 -Y228 0.202447715419336 I216 -D221 0.196080775663282 K111 -V116 0.194155075821161 S222 -N231 0.184515119975747 S113 -N231 0.183862837172912 L119 -N130 0.177838739484723 S113 -Y228 0.170022840880404 S113 -L122 0.164389119317821 L118 -S222 0.160775587125785 V116 -A223 0.159590788321769 V120 -A223 0.156257462174986 N130 -D221 0.148763005092371 N130 -S213 0.147688166077828 S212 -L217 0.14488039990141 S224 -N231 0.143764017308894 S113 -V227 0.142333860484067 W226 -G232 0.140058923850126 L122 -Y228 0.139772838050709 S126 -V131 0.139486726754614 S212 -N220 0.137988503017641 L119 -L125 0.135884616712218 I124 -N130 0.13505216735348 A223 -N231 0.128639998576871 Y133 -L217 0.123031571638174 K111 -V120 0.121393971184018 L118 -L229 0.119265633806895 V120 -L225 0.116082727136731 S222 -A230 0.113615703947831 L119 -L229 0.109428087301562 L119 -S126 0.108217997857577 S213 -D221 0.106731582219615 S113 -A223 0.102577417889453 V120 -G232 0.101305929688997 V120 -S126 0.0990316535527835 D221 -L229 0.0983793237823576 G115 -V120 0.0958284029884724 S222 -V227 0.0957262147630917 D221 -Y228 0.0907257832899653 V117 -Y228 0.0891345238536978 L215 -S222 0.0876422615005699 V117 -A223 0.0866400338209368 L121 -S224 0.0841459812281702 L118 -L123 0.0823319202531998 V116 -S224 0.0814242728486727 Y133 -S212 0.0807263541837901 V117 -W226 0.0804187495016215 L121 -V227 0.0788981085279075 Y133 -M214 0.076468252641093 V117 -N220 0.0760160701072012 V117 -I219 0.0749789572354858 V210 -L217 0.0747131443025137 L123 -V131 0.0743461780482755 V110 -L121 0.0730542909797238 S126 -Y133 0.0682267430312682 V120 -N231 0.0673004720310293 L125 -E132 0.0647780148848938 I124 -V131 0.0628114728401368 L225 -G232 0.0607074915768142 V117 -L225 0.0573567858653989 L119 -R127 0.0549502395818835 L125 -V131 0.0548661548194991 G115 -V227 0.0522321880129211 L114 -L119 0.0501071384450542 L119 -A218 0.0482196009017493 V210 -A218 0.0476445198949609 M112 -L118 0.0466086395008922 L122 -S128 0.0457646869231998 L119 -S222 0.045518801923806 L215 -N220 0.0452740361131085 Y133 -S213 0.0449745764046821 L118 -A230 0.0425132473040659 M214 -D221 0.0396172637602756 N220 -L225 0.0324646318486437 L122 -S224 0.0275813491549481 M214 -A223 0.0264802995173401 L215 -A223 0.0206413372006509 S212 -D221 0.0197569603239101 N220 -W226 0.0193488864690194 G115 -L121 0.0164344549479791 L225 -A230 0.014604398787279 V120 -V227 0.0134089760922986 S113 -S224 0.0133380150208859 L217 -W226 0.0103068675582589 L217 -L225 0.00871683984943594 L217 -S222 0.00825181545184606 V116 -N220 0.00483547323385713 L118 -L217 0.00462467889887463 K111 -V117 0.00351132958901523 I124 -K129 -0.00723035256631466 S113 -V120 -0.00976893271871937 I219 -W226 -0.0165895642501308 V120 -A230 -0.0171001885095297 S224 -G232 -0.0185691564818217 L119 -I219 -0.0185775495963618 I216 -S224 -0.0189922891754959 V120 -S222 -0.020301890873534 L122 -V131 -0.0212422600398394 I124 -E132 -0.0249127444715569 V210 -I216 -0.0280678516180819 I219 -S224 -0.0284305610383253 A218 -V227 -0.0296617953629092 M112 -L121 -0.0332243962622636 L118 -D221 -0.0332796062481278 L119 -V227 -0.0336533817781319 V210 -I219 -0.0337806506430347 R127 -E132 -0.035528938236937 V120 -N220 -0.0379090774926731 S126 -E132 -0.0394640786827374 Y133 -I216 -0.0409481880943732 V116 -V227 -0.0488797040383275 L114 -L121 -0.0503926410453044 M112 -L119 -0.0505099061094247 A211 -I219 -0.0513750369701205 V120 -L125 -0.0533655880155068 V116 -Y228 -0.0558334641947402 A218 -W226 -0.0563266966648501 I216 -L225 -0.0596540525648752 M112 -V120 -0.0606583779436571 N220 -A230 -0.0639206176626201 S128 -Y133 -0.0652665370804533 L114 -L122 -0.0665777310204962 L118 -W226 -0.0692355423226063 A211 -N220 -0.0702837136867371 V120 -L229 -0.0704275668570791 L119 -N231 -0.0704375529410604 L217 -S224 -0.0707167105903412 V117 -S222 -0.0738398323653009 N130 -L217 -0.0776114438845887 L118 -L225 -0.082490356679882 L118 -I219 -0.0860335385583566 L122 -D221 -0.0866212222196274 I216 -A223 -0.0885493463383664 I124 -Y133 -0.0889715970146772 L119 -Y228 -0.0908199525651425 R127 -Y133 -0.091730323296788 V120 -W226 -0.0937346476116305 I219 -Y228 -0.0964857656952378 V110 -L122 -0.100848128233507 K111 -L119 -0.10293894903942 V116 -L121 -0.103063465886822 L121 -Y228 -0.104452868940921 L122 -V227 -0.104985027247785 L114 -V227 -0.105384109374158 V110 -V116 -0.106410582377798 S113 -L118 -0.10843133510769 M214 -N220 -0.114506802263861 S222 -Y228 -0.121149373254957 L121 -R127 -0.127994021795564 L122 -L225 -0.130856402900649 L118 -S126 -0.132346137383079 L225 -N231 -0.13319905211752 L119 -N220 -0.13382493298583 D221 -V227 -0.136740241747531 S113 -L119 -0.138601274461525 V116 -W226 -0.139657287839159 D221 -W226 -0.13967635258125 L121 -L225 -0.140593972148277 L118 -N220 -0.142130796334347 M112 -V227 -0.147666208897431 A218 -L225 -0.148204918695946 D221 -A230 -0.149907661565835 V227 -G232 -0.150950004936738 L119 -L217 -0.151012495445116 A223 -L229 -0.15602357304841 L125 -Y133 -0.157245568199737 L114 -S224 -0.160862938892471 L119 -I124 -0.164933609665286 L118 -Y228 -0.165244399444831 L215 -S224 -0.165718617350739 L119 -A230 -0.165778130527963 L119 -A223 -0.167990152700338 L119 -K129 -0.169474939763123 V110 -L119 -0.170836386246738 A223 -A230 -0.172634057838282 M214 -S222 -0.173430472354302 K111 -L118 -0.178570825065337 L125 -N130 -0.180665273996916 S222 -L229 -0.18205171615731 L122 -K129 -0.182578065610222 L123 -K129 -0.185491788327671 L121 -K129 -0.18841021628225 N220 -L229 -0.192195472884277 V117 -L122 -0.192689925663776 L118 -N231 -0.193718784216679 L121 -N130 -0.195791742789805 L123 -S128 -0.196311951340648 K111 -L121 -0.196704426167644 S212 -A218 -0.19764633888852 L123 -N130 -0.198151650599404 L118 -A223 -0.208375601660457 I219 -V227 -0.209486784032686 L119 -W226 -0.212803310939054 A218 -S224 -0.217078294150475 L122 -N130 -0.218620571434633 S113 -L121 -0.218919475560583 S224 -L229 -0.221112438956322 L119 -L225 -0.221626346205576 I216 -S222 -0.223991176016122 A211 -L217 -0.226022760316279 S224 -A230 -0.227758697222838 S212 -I219 -0.228896614489877 L217 -A223 -0.232087871647294 V110 -G115 -0.238620750640768 V120 -S224 -0.244948026407625 L121 -S126 -0.259352562709078 V120 -Y228 -0.266066446324408 L215 -D221 -0.268342123617487 V117 -S224 -0.285801756731724 N220 -V227 -0.296100169619563 L119 -D221 -0.306711042501338 S213 -I219 -0.323527074883205 A223 -Y228 -0.323597004693124 I219 -L225 -0.330446452652937 V110 -V117 -0.332164030083812 V110 -L118 -0.352276838563903 V117 -V227 -0.353023906151382 V110 -V120 -0.353073199505813 M214 -I219 -0.383281288678845 A211 -I216 -0.393388954611353 A218 -A223 -0.394528341581749 L114 -V120 -0.403054181535079 S213 -A218 -0.54723241145933