[Mon Aug 29 18:01:45 2016] >Input file: TMA0A109SZ41M1G.pdb >TM segments: 146-168_ 219-236 MAIDEN score = -9.7803 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V153 -F158 0.933713365374713 Y152 -I226 0.90431560941708 L149 -I226 0.783811616552959 V153 -I226 0.78211828511967 T162 -V167 0.649586891972574 V153 -A225 0.596334128756134 Y152 -V157 0.570411539299977 V219 -L224 0.549571676370935 V157 -G221 0.515354092230828 L149 -F229 0.500473518035957 F150 -I226 0.463488065883044 V160 -V165 0.419606238310348 M155 -V165 0.336433635386711 V154 -A222 0.30735025437043 L220 -A225 0.299843918552345 L156 -A161 0.280090234903807 A161 -A222 0.273149070696388 V154 -L159 0.25508195170286 M155 -V160 0.215074096136648 L149 -V154 0.209917504497083 V160 -G221 0.209567419129557 I226 -A232 0.17843047850402 F147 -V154 0.174614449438618 F229 -G235 0.164940699387441 L149 -L230 0.155743715535693 F146 -V153 0.148871836108117 A225 -T233 0.145681201235326 G221 -I226 0.14544460009849 L159 -G221 0.138701419844775 V160 -V168 0.135167229145045 V157 -L224 0.128792868886288 L149 -V223 0.127743181343976 V153 -V223 0.122782692193704 A161 -V168 0.121160716012274 F146 -A232 0.119972067489569 A148 -L234 0.107457145371836 Y152 -A161 0.107193510358673 L151 -A161 0.106849031079914 A148 -A225 0.099599120851642 L156 -L220 0.098112560764466 L151 -V160 0.0971627371179857 F147 -A225 0.0967479926324839 L156 -P164 0.0961926844387295 A227 -G235 0.0958598619169223 L156 -V228 0.0951034368801491 A161 -L220 0.0944606070249971 L159 -I226 0.0938017842234385 L151 -A227 0.093740794904127 V154 -L224 0.0934840474939369 F150 -T233 0.0893222244635162 L220 -F229 0.089101947612976 A148 -A222 0.0876505513596992 Y152 -T162 0.0824125686995947 M155 -P164 0.0822238546811822 L230 -G235 0.0802887469263159 M155 -V223 0.0786361138764553 V154 -A225 0.0755396802661634 V154 -L220 0.0751674535743327 L156 -V165 0.0748665593388234 V153 -I231 0.0724935856258351 A222 -A227 0.0721399612352664 L224 -F229 0.0705197103664323 V160 -I226 0.0704546001435538 G221 -F229 0.0702680086326231 A161 -A225 0.0691580887774599 Y152 -V228 0.0656520562354426 L156 -A227 0.0651787463575599 V219 -V228 0.0636503124612098 F150 -L234 0.0632583728451621 V153 -V219 0.061601042639432 Y152 -V160 0.0614447384083938 V223 -V228 0.0608489012208331 L156 -A163 0.0588073481754021 A161 -V223 0.0566490745282779 F158 -I226 0.0554160210732327 V153 -A161 0.055160109761649 L230 -L236 0.0527601116029697 M155 -L224 0.0520495370169625 V153 -L220 0.0519264252107137 A161 -V219 0.0514496699850788 P164 -G221 0.0511038564373347 A148 -L230 0.0508792646534566 F150 -G221 0.0494954209710929 A148 -I231 0.0486392767729082 V219 -I226 0.046394173785778 A148 -A227 0.0463330891297075 A222 -L230 0.0454606126069599 L220 -L230 0.0438343527663516 L151 -L230 0.0437031199861213 A225 -A232 0.0423880220038129 F146 -V154 0.0420669396136255 L151 -G221 0.0402649130363593 L224 -A232 0.0373774986707738 L151 -V223 0.035412436053103 F158 -L224 0.0338563616023464 V154 -T162 0.0335604414022521 V160 -V219 0.0325898490001215 Y152 -L230 0.0322535234394365 V153 -L159 0.0321623414819783 F150 -I231 0.0319998934828707 L224 -L230 0.0283594843782371 L149 -G221 0.0281739113249131 L156 -L224 0.0263843418718457 F146 -G235 0.0227130160851639 V223 -L234 0.0222696379255121 F146 -M155 0.02085059087347 V157 -A227 0.0187496151532747 M155 -I226 0.0166523436433446 G221 -L230 0.0101985579222905 M155 -A163 0.00751023330818335 L159 -M166 0.00646527426480148 M155 -G221 0.00526948425656837 V153 -V228 0.00487003446614032 L151 -L159 0.00425667531012497 A148 -V223 0.00333061797091272 F146 -V228 0.00227271146095198 V160 -A222 0.0022348712195055 F147 -A227 0.00191345183701785 V223 -F229 0.000391505481466936 F146 -L230 -0.00131701407337736 F147 -T233 -0.00158725115529879 Y152 -I231 -0.0034839853494848 M155 -F229 -0.00420307194121339 F147 -I226 -0.00552196640129621 A148 -V228 -0.00728230284798015 V153 -T162 -0.00762061577770146 V154 -A227 -0.00777305783086546 F146 -F229 -0.00851935825324901 F150 -A222 -0.00904993121641962 M155 -A225 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-0.0376216120552879 V157 -A225 -0.0387738195794736 V157 -V228 -0.0422876316236798 F158 -A222 -0.0446737240086841 F146 -L151 -0.0481105243831061 F150 -L159 -0.0481300463326333 L151 -I226 -0.0484644130784293 L149 -I231 -0.0485466458710672 Y152 -A227 -0.0506606571119104 F147 -L230 -0.0525488282077315 A148 -V157 -0.0548490296742954 V219 -A225 -0.0565678769496136 Y152 -G221 -0.0639823558183377 F150 -V228 -0.066224806785764 Y152 -A232 -0.0670441044778081 V157 -T162 -0.0676206156743433 L149 -A232 -0.0716687880615829 T162 -G221 -0.0721909085878374 Y152 -L224 -0.0737480641708839 V154 -G221 -0.0742392680512456 Y152 -V223 -0.0751890389205752 I231 -L236 -0.0752361948248992 A148 -T233 -0.0774279380134255 F146 -I231 -0.0801225033112258 A225 -L234 -0.0808542659277478 F158 -L220 -0.0842026692781763 L156 -F229 -0.0853327066996838 V153 -L230 -0.0853404812118486 A227 -T233 -0.0853682067767589 F229 -L236 -0.0860137031841872 F147 -Y152 -0.0861563358789606 L156 -V219 -0.0861776777271688 A161 -M166 -0.08786411973181 L224 -T233 -0.0881797455114917 L151 -A225 -0.0908951552190294 I226 -L234 -0.0936791853394384 F147 -L156 -0.0937895268963174 F146 -A227 -0.0946240561548262 V165 -G221 -0.098833421132734 V157 -M166 -0.100033849252615 V160 -V167 -0.102374862216039 V228 -G235 -0.102450772006251 L151 -V228 -0.105031782483454 F158 -G221 -0.105045615677802 A148 -L156 -0.106310525338951 V157 -V219 -0.106933690075155 L159 -A222 -0.107892615062486 L159 -P164 -0.109991080622837 F146 -V223 -0.112549248949048 A148 -F229 -0.112969639201116 V154 -F229 -0.117666098888342 F150 -L156 -0.120207186123901 F150 -L230 -0.120412543748321 Y152 -L159 -0.120466829952431 F147 -L234 -0.123877384360625 F229 -L234 -0.123964067753343 F146 -L236 -0.123968315902801 F150 -F158 -0.124376972213776 F150 -A227 -0.124706598558494 L149 -F158 -0.125155911140394 I226 -T233 -0.125678922049634 F147 -F229 -0.125771000199129 L224 -L234 -0.128001764643969 L151 -V157 -0.129826750405748 V157 -F229 -0.130342195990816 A161 -G221 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-0.214056746985085 M155 -A222 -0.216074198351012 L149 -V157 -0.228859811958496 L156 -V223 -0.230663062459038 L149 -T233 -0.230881832405392 L220 -I226 -0.231098746573604 F150 -F229 -0.233351580836176 A225 -L230 -0.245109047894071 V153 -G221 -0.245170970994499 F158 -P164 -0.245669654259061 F158 -M166 -0.250153607132742 M155 -T162 -0.250744085960465 V160 -M166 -0.254868712015497 L149 -A222 -0.26053771056229 L220 -A227 -0.261557360233079 L151 -A222 -0.261864717841349 G221 -A227 -0.266803869829229 T162 -V168 -0.267331329165824 F146 -I226 -0.270663559238905 V228 -L234 -0.271669237673208 A148 -V154 -0.276045097050088 I226 -I231 -0.277646630159484 Y152 -A222 -0.282270819160302 L156 -A222 -0.294788657161694 Y152 -A225 -0.302285863778313 F150 -V223 -0.303194727118242 F147 -V153 -0.304250378388831 V153 -V160 -0.308568259631162 L156 -T162 -0.309594504209658 V154 -A161 -0.312163387184375 V153 -A222 -0.322726061655235 L156 -G221 -0.328865616857327 F158 -V165 -0.331686821047712 V157 -V223 -0.351529360556427 V153 -A227 -0.35537338592505 A161 -V167 -0.365891788485365 A222 -V228 -0.369214007532256 V154 -I226 -0.383555696060517 L159 -V165 -0.385144813739473 V153 -L224 -0.389529850208513 M155 -A161 -0.409675188841558 F158 -A163 -0.411762183156807 L156 -I226 -0.417110068425665 L224 -I231 -0.417928475980453 V157 -I226 -0.460162990141881 L149 -M155 -0.482107553267716