[Fri Aug 26 16:28:07 2016] >Input file: TMA0A120J3G7M1D.pdb >TM segments: 303-352 MAIDEN score = 87.2490 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C329 -R339 10 C329 -L338 10 M312 -P337 10 P310 -A336 10 L330 -R339 10 P310 -Y335 8.15446933095927 L314 -C329 7.42628248198059 P310 -P337 3.24800215651234 V318 -L325 2.77233625086773 P313 -P337 2.10421612205854 I316 -V328 2.1041390137284 A336 -V341 1.84162557435465 S334 -L346 1.15696982504776 I316 -L325 1.1034645110735 L330 -L338 1.07591850981618 T309 -Y335 1.05657685513944 L317 -L325 1.03659751401252 L314 -L338 0.965369466657769 L314 -L330 0.93621736005074 V318 -S326 0.935240596507669 V328 -L338 0.850275523791403 I316 -L338 0.811029587518574 L314 -V328 0.735757047122862 M312 -L338 0.723218085735189 I332 -S340 0.716890088724528 I316 -S326 0.707576693435897 L317 -L338 0.704265215444377 A344 -L350 0.665067414444426 L317 -V328 0.646982491049363 P315 -L338 0.639877496003697 S334 -G345 0.593782280279437 L314 -P337 0.564955015077018 T309 -P337 0.462168145351743 Y335 -V341 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