[Mon Aug 29 16:50:24 2016] >Input file: TMA0PSI7M5G.pdb >TM segments: 328-343 MAIDEN score = -2.1035 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R330 -N338 0.324589656637348 N335 -S342 0.262497441849326 S331 -S340 0.213276317388883 F334 -V341 0.204980310916317 R330 -W337 0.179305947275716 A333 -V341 0.15751962361204 N338 -Q343 0.154400740357432 S331 -N338 0.139473252223239 A333 -S342 0.114878764298357 S331 -L339 0.112198870036774 R329 -N338 0.0976263997718014 I332 -V341 0.0753968934603308 R329 -W337 0.0526405636164062 G336 -Q343 0.0404792797258957 F334 -S342 0.0117992180514701 G336 -V341 -0.000673844115473443 R330 -G336 -0.00305491884157227 N335 -Q343 -0.00351291128591313 A333 -S340 -0.030527895080863 V328 -N335 -0.0346453654597916 W337 -Q343 -0.0479561383103249 R330 -L339 -0.0651190543045381 F334 -S340 -0.0757441704904565 W337 -S342 -0.0859612467510165 I332 -S340 -0.0876231969325199 R329 -G336 -0.105366171592705 F334 -L339 -0.11228971245488 R329 -F334 -0.116283269273613 I332 -L339 -0.116860674683193 V328 -G336 -0.125845982182241 N335 -S340 -0.134625608046544 G336 -S342 -0.14446986601708 A333 -N338 -0.162129139402264 R329 -N335 -0.168105205495852 I332 -W337 -0.173395768112942 V328 -W337 -0.176637868644614 A333 -L339 -0.189895448396286 N335 -V341 -0.21069052873671 S331 -G336 -0.215348382272603 S331 -W337 -0.238734628676616 I332 -N338 -0.298404970866013 V328 -A333 -0.365254177840844 V328 -F334 -0.365759918933807 R330 -N335 -0.389670588991707