[Mon Aug 29 16:54:19 2016] >Input file: TMA0QNR9M1G.pdb >TM segments: 188-196_ 203-209_ 227-233 MAIDEN score = 27.0492 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A191 -V207 10 P204 -N232 10 I206 -T230 2.06801505370816 E208 -L228 1.25189766127131 V192 -V207 0.929248696135538 V207 -D231 0.899402651229911 A191 -R205 0.837012619402703 V192 -R205 0.713099012456065 V207 -L228 0.707093514433647 V207 -A229 0.623804926859943 H193 -D231 0.584545247543064 I206 -L228 0.48685483071741 V192 -I206 0.395292898802268 A191 -I206 0.388475741313824 H193 -I206 0.365235099527769 Q209 -A229 0.349645549814658 H193 -R205 0.349322392335624 E190 -T227 0.335701093599762 V207 -T230 0.331494931580201 E190 -T230 0.321829905124027 I206 -A229 0.320423374008139 E194 -V207 0.299967274960899 G203 -N232 0.289448983893525 E190 -V207 0.281311593337133 E208 -A229 0.276964990612578 V192 -E208 0.271550432254804 E190 -E208 0.263296405886687 E208 -N232 0.262489700935261 H193 -L228 0.26133294093137 P204 -Y233 0.234986239164376 R205 -A229 0.23483901875664 V192 -D231 0.210859457275346 R196 -Y233 0.2106713860567 Q209 -L228 0.206254587316861 P204 -L228 0.205111604892752 V192 -L228 0.183955411862708 V207 -Y233 0.182434681706392 I206 -D231 0.181836463914961 Q189 -V207 0.159287510131598 A191 -Q209 0.153008449706807 G203 -D231 0.143536026684563 E208 -T227 0.128081276879125 P188 -A229 0.122907847006868 A195 -D231 0.119110469510221 Q189 -R205 0.119092296407421 P188 -Q209 0.114757332208457 A191 -G203 0.113563885630743 R205 -Y233 0.105980689635212 V192 -T227 0.0972165202575466 E190 -R205 0.0950745812339759 R196 -D231 0.0892249201281015 A191 -T227 0.0889647975478565 V192 -G203 0.0766771322270847 V207 -N232 0.076509846744468 E194 -G203 0.0724925280470416 A195 -T230 0.0703503282834577 E194 -L228 0.0699554034200616 E190 -D231 0.069671542323098 P188 -L228 0.067789694180691 A195 -A229 0.0673253501120268 R196 -T230 0.0670843373333333 V192 -P204 0.0566792744918678 H193 -A229 0.054023783743121 H193 -G203 0.0483247575385777 I206 -N232 0.0452939358986231 R196 -R205 0.0439313384159725 A191 -N232 0.0358546767565149 E194 -I206 0.0304447322898982 A195 -V207 0.0219841488685713 H193 -Q209 0.0187681323147212 E194 -Y233 0.0150060652479351 H193 -V207 0.0146018661782059 Q209 -D231 0.0138570473983741 E208 -T230 0.0119350577814517 G203 -A229 0.00432439447477218 H193 -E208 0.00340387241017948 H193 -P204 0.00256012351077795 A191 -E208 -0.00625025745476826 H193 -Y233 -0.00658628763230773 R205 -T227 -0.0114063299018032 G203 -T230 -0.0167981440719256 Q189 -L228 -0.0211535746700231 Q189 -I206 -0.0235226147274277 E194 -Q209 -0.0259095854029459 P188 -V207 -0.0263830998677435 A191 -R196 -0.0266466287103109 V192 -Q209 -0.03168141053666 Q189 -T230 -0.0369295742019805 Q189 -Q209 -0.0389607476124847 V192 -N232 -0.041564512441715 Q189 -A229 -0.0428600845901739 H193 -N232 -0.0474638290116047 E208 -D231 -0.057987878939336 E194 -E208 -0.0592502052714803 A195 -Y233 -0.0615922182570015 I206 -Y233 -0.063293390413417 P204 -T230 -0.0633623514043871 E194 -A229 -0.0675284101784746 P188 -I206 -0.0716403807859942 Q189 -D231 -0.0740802934944709 V207 -T227 -0.086020764331443 A195 -E208 -0.0890204083090453 E190 -I206 -0.0893705719520135 Q189 -T227 -0.100670238674389 E194 -D231 -0.102894169214399 P188 -T227 -0.105156399468456 P204 -A229 -0.11145544309957 A191 -Y233 -0.112733100665855 A191 -L228 -0.117240129535094 P188 -E208 -0.12338055332555 A191 -T230 -0.126545349249632 H193 -T227 -0.127123065006014 A195 -N232 -0.13121465234447 H193 -T230 -0.134115984983857 R196 -I206 -0.134218405245543 A195 -I206 -0.136475609285181 R196 -G203 -0.141471816366036 A191 -P204 -0.151905246083078 E190 -A229 -0.160406564710708 Q209 -T230 -0.176264400587846 E190 -L228 -0.177022966607774 E194 -T230 -0.179283902119409 R196 -N232 -0.18133355690884 V192 -T230 -0.184622267213533 R196 -V207 -0.189513409964845 R205 -L228 -0.20458441182576 R205 -N232 -0.208577583431499 Q209 -T227 -0.210926993710459 P204 -D231 -0.211436223518747 E194 -N232 -0.21932968045143 A191 -D231 -0.225599649299683 I206 -T227 -0.240524590168102 E194 -P204 -0.271982262960858 A195 -P204 -0.290289733413272 A191 -A229 -0.294739720046743 A195 -R205 -0.326259439215376 V192 -A229 -0.336897390716623 R205 -T230 -0.37712923063845 E190 -P204 -0.38149034213034 Q189 -E208 -0.406761761196249 E190 -Q209 -0.430308698674329 A195 -G203 -0.433392228549197 G203 -Y233 -0.444212463979243 R196 -P204 -0.606460154214315 R205 -D231 -0.672658173118479 E194 -R205 -0.889253136981788