[Mon Aug 29 16:59:32 2016] >Input file: TMA0R099M1G.pdb >TM segments: 100-135 MAIDEN score = 11.3713 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E111 -I116 9.4618503271555 V126 -P132 1.44494679663717 V126 -A133 0.994559791863466 R124 -A133 0.64570698629935 P107 -G113 0.592368412820401 P125 -P132 0.582737909021052 L105 -V110 0.556771109677335 P125 -I134 0.446803873396 V126 -V131 0.444711239431679 E103 -V110 0.426031185419213 F108 -I116 0.371678032346439 F102 -E111 0.33377071669468 E127 -A133 0.330724727441621 P100 -P107 0.307907976264004 E103 -P114 0.271793804785256 Y122 -P132 0.267594882754664 E103 -T115 0.241764252628924 V110 -T115 0.240397625077536 V126 -I134 0.236290146793414 L105 -G113 0.218873299499718 V110 -I116 0.210762546139155 G112 -L117 0.199684669385659 V104 -G113 0.198252320044365 P107 -L117 0.170542290367476 V110 -V118 0.168392113868497 V104 -E111 0.157886914888847 E111 -R120 0.157366550640296 P107 -P114 0.156080012028088 V118 -V123 0.152362081277285 P100 -P114 0.149160547982926 A109 -P114 0.117190701280472 E103 -G112 0.114654446839532 L117 -Y122 0.108785858549535 A109 -L117 0.107202550811854 V123 -I134 0.104396831778873 Y122 -I134 0.0969175431571774 G113 -V118 0.0914018754022567 V123 -D135 0.0902994655385427 F102 -T115 0.0895050526586438 F102 -G112 0.0884008183176062 E111 -D119 0.0780961799978128 L105 -E111 0.0768842889346399 V118 -P125 0.0643215399151158 A101 -I116 0.0584010294563875 L105 -I116 0.055270135942961 F108 -T115 0.0535327659223168 R120 -V126 0.0526257041881518 V123 -A133 0.0508013088953634 V123 -G130 0.0496480961176209 V104 -A109 0.043546240754377 F102 -A109 0.0357544158667142 L105 -T115 0.0350261664266789 F108 -P114 0.0340507129691612 D119 -R124 0.0333681075282062 A101 -T106 0.030201066251583 E103 -G113 0.0301970238169358 R124 -I134 0.0271510515292048 F102 -I116 0.0264463284508176 S129 -I134 0.0236780791916589 A101 -T115 0.0208531028266112 T106 -G113 0.0205298608844207 A101 -P107 0.0129272125907205 S129 -D135 0.00863015930539415 V104 -I116 0.00456907722628408 A101 -V110 0.00425858514330901 V104 -T115 0.00155510125558023 G121 -V126 0.000504666832514378 D119 -P125 -0.00537715980755005 T106 -L117 -0.00744486350540363 G128 -I134 -0.00886788649227932 A101 -P114 -0.00912437622621987 P107 -V118 -0.0105307438616116 P100 -G112 -0.0112713613852942 G128 -D135 -0.0178011018150606 P100 -G113 -0.0217286142740121 A109 -T115 -0.0220465554552991 A109 -V118 -0.0289069916427387 R124 -D135 -0.0290610464808854 V123 -V131 -0.0306004446772254 P107 -I116 -0.0410856825205088 F102 -F108 -0.0451182794199045 P114 -D119 -0.0524791609105754 R124 -S129 -0.0543812296902472 F102 -P114 -0.0555986915847337 T106 -I116 -0.056521396871716 A101 -E111 -0.0567647824212472 G130 -D135 -0.0570669031420317 F102 -V110 -0.068673831266727 Y122 -A133 -0.0717765252695735 V104 -P114 -0.0766335757881495 E127 -D135 -0.0818006362145787 L105 -P114 -0.0838280366668962 G112 -D119 -0.0911918307556951 R120 -P125 -0.0918822104012911 E103 -E111 -0.104038966738376 P107 -T115 -0.109903561775022 P100 -I116 -0.113188024454898 G113 -D119 -0.113211657729607 E111 -L117 -0.115630797634389 A109 -I116 -0.117399099616394 F108 -V118 -0.117448201576292 F108 -L117 -0.120610135506006 G112 -V118 -0.124091525418116 F102 -G113 -0.131894083490047 R124 -V131 -0.137508012658624 E127 -I134 -0.139052190219719 T106 -E111 -0.152996661005269 E103 -I116 -0.154993701443402 E103 -L117 -0.15724792282875 E127 -P132 -0.15780557031397 V126 -D135 -0.185810024165555 T106 -T115 -0.1859951547336 R124 -G130 -0.186727139469984 V104 -G112 -0.18685213991962 P125 -G130 -0.192502869791379 T106 -G112 -0.198989393089903 V123 -P132 -0.209036283292511 T106 -P114 -0.219493566406847 P125 -A133 -0.220003671347495 V104 -V110 -0.223243353252814 V110 -L117 -0.238986159497381 F108 -G113 -0.245273462095755 P125 -V131 -0.247489380034806 F102 -P107 -0.248564377043568 L105 -G112 -0.250474636690615 A101 -G112 -0.251903392337271 V118 -R124 -0.26466568825633 V110 -D119 -0.266891246228836 E103 -A109 -0.277984048458966 E111 -V118 -0.333483328061306 E103 -F108 -0.348510625156928 P125 -D135 -0.412718454984071 A101 -G113 -0.415014640181191 G128 -A133 -0.468838431691613 R124 -P132 -0.559411641509112 P107 -G112 -0.614655943730869