[Mon Aug 29 17:00:03 2016] >Input file: TMA0R0P3M1G.pdb >TM segments: 248-274 MAIDEN score = -6.7801 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K251 -A256 0.989257231575222 P248 -M253 0.363803733154894 A255 -Q260 0.308029375444933 L254 -A259 0.284247051556354 K251 -S258 0.266165234326614 M253 -Q260 0.254808434174625 P248 -L254 0.235833284967292 A262 -F269 0.209300047556376 P252 -Q260 0.202930485406122 K251 -Q260 0.18394386628128 S258 -V265 0.161065108173259 S258 -P266 0.147684936176352 F267 -V272 0.122678458417179 A262 -L271 0.113360571759693 A259 -P266 0.108682677664806 A262 -G270 0.106413758434037 A256 -L264 0.0904168588643992 A256 -T263 0.0888166416560869 A255 -T263 0.074327425136933 F267 -A274 0.0680771968425908 P266 -V272 0.0578578241832175 I261 -F269 0.0563276051134349 Q260 -G270 0.0343713882425654 F257 -V265 0.0321891015081791 A259 -F267 0.0156806697649436 S258 -T263 0.0134903646406848 S249 -F257 0.00597083478444826 P266 -A274 0.00589576086521681 M253 -I261 0.00332165853157118 T263 -G270 0.000720175021830416 W250 -F257 -0.00332552564460453 V265 -T273 -0.0124123686340019 Q260 -V265 -0.0238254587889761 A255 -L264 -0.0289024720825717 M253 -A262 -0.0364640873867872 K251 -A259 -0.0391579169858924 I261 -P266 -0.0458906270483372 L264 -V272 -0.0474190326625807 A262 -F267 -0.0543833579496695 P252 -S258 -0.0556933535805095 P248 -A259 -0.0607597334282328 Q260 -F267 -0.0723397416859113 Q260 -F269 -0.0757373524184264 S258 -F267 -0.0776889062524723 L254 -I261 -0.0782666612209821 P252 -F257 -0.0805432149310725 P266 -T273 -0.0822341735799068 I261 -L268 -0.0833079685417166 T263 -V272 -0.0833908875997622 I261 -G270 -0.0863844788783674 Q260 -L268 -0.0867221105296503 L264 -T273 -0.0874426652084299 T263 -L271 -0.0949863328445133 L254 -A262 -0.0994303891430182 L254 -T263 -0.106758993039523 A256 -A262 -0.110103730196531 P252 -A259 -0.116323606251663 P248 -S258 -0.11978928330684 A259 -L268 -0.119882964312136 F257 -L264 -0.122059411256854 F269 -A274 -0.124848935297235 P252 -I261 -0.127637039546547 W250 -A255 -0.134901893440333 L264 -F269 -0.13896416982293 P248 -A256 -0.139618200010951 A259 -V265 -0.149285771243134 A255 -A262 -0.151912094158031 M253 -S258 -0.154735894222347 L264 -G270 -0.166792545559168 P248 -F257 -0.172115008442585 L268 -A274 -0.180250740236152 P266 -L271 -0.190521483372009 S258 -L264 -0.191444175334424 S249 -A255 -0.194809832963888 S249 -A256 -0.198189649889705 V265 -G270 -0.198500834158695 K251 -F257 -0.208761754896684 S249 -L254 -0.216213197802309 L264 -L271 -0.21860822678876 F257 -T263 -0.236113411205382 L254 -Q260 -0.238606839812421 L268 -T273 -0.239520554217282 W250 -A256 -0.239650356930674 I261 -F267 -0.256222503630778 M253 -A259 -0.259939810806626 T263 -L268 -0.26458735033963 A262 -L268 -0.272559114980719 F267 -T273 -0.289265389993472 V265 -L271 -0.299756709045067 A259 -L264 -0.302725710474149 A255 -I261 -0.33181396569461 V265 -V272 -0.340417399040067 A256 -I261 -0.401639951580292 P248 -A255 -0.430271152391363 F257 -A262 -0.443012246653168 T263 -F269 -0.467161261785564 Q260 -P266 -0.622783794492677