[Fri Aug 26 16:50:53 2016] >Input file: TMA0R337M1D.pdb >TM segments: 144-158_ 164-179 MAIDEN score = 35.6994 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q169 -L175 10 A171 -F176 10 Q169 -F176 9.22400336294851 A172 -L177 3.72246761740473 I170 -F176 3.26475575334109 I168 -L175 2.47383499397876 I170 -L175 1.22997714118011 I168 -V174 0.818187570348052 A171 -F179 0.613862569034651 Q169 -L177 0.610948446003217 V146 -L177 0.5956196296949 I168 -F176 0.544266849011788 A172 -F179 0.520189534396515 A171 -L177 0.507530178115635 A150 -L175 0.485477924879098 I170 -L177 0.480885106619489 M167 -L175 0.428340310382858 A157 -P164 0.423477391930157 A150 -V174 0.386442363109784 Q169 -V174 0.379132390980985 A147 -A173 0.353394837448568 D149 -V174 0.311438599919268 I170 -G178 0.310692210211347 A147 -A171 0.307393067170457 A150 -L177 0.298498606850427 I158 -P164 0.293291699516743 A147 -L177 0.288187742151374 A150 -A173 0.276268778175655 D149 -M167 0.275626047849911 G144 -L177 0.264286658101121 A150 -A171 0.258941433722215 A147 -G178 0.243941435471166 V146 -A173 0.227373070883882 D149 -G156 0.223221283965106 P164 -Q169 0.216963775106341 M167 -V174 0.213015789510658 V154 -P164 0.197618133840321 L151 -P164 0.180874598202181 A172 -G178 0.175351848391343 G144 -A171 0.164305128119458 M167 -L177 0.163162425130398 I158 -I168 0.162669567000697 L151 -V174 0.161794700051159 M167 -A173 0.141643807463045 M145 -A173 0.140264299120113 A150 -I168 0.136589466237034 A150 -F176 0.131280989700867 A152 -P164 0.123850164157579 Q169 -F179 0.115672883502882 V154 -F176 0.112783792838968 A157 -V174 0.112575088530565 A152 -A173 0.109248147631641 A150 -P164 0.107601093107833 A148 -A172 0.10472327855005 L151 -Q169 0.103539071467161 V146 -G178 0.10221755445287 D149 -F176 0.100212567816885 A150 -M167 0.0988371022001795 R166 -F176 0.0981946507782516 G144 -V174 0.0941563826444607 L151 -I170 0.092451188314925 G144 -A173 0.0911826083778831 I168 -A173 0.0894026335294464 V154 -L177 0.0884216782390639 A148 -V174 0.0757819579367363 V154 -M167 0.0653727509803836 G144 -A172 0.0645715733978989 V154 -Q169 0.0612434125562207 A150 -F179 0.0591779735893299 A152 -F176 0.0591350525459404 G156 -M167 0.0584860820898951 A157 -L175 0.0578806914144385 G156 -P164 0.0578574438209867 M145 -A172 0.0563379746850408 V146 -Q169 0.0558898508965373 V146 -V155 0.0556729239167471 I158 -L175 0.0553331952245824 V155 -R166 0.0505125713543211 M145 -F176 0.0494150025101483 P164 -F176 0.048798730628389 D149 -A173 0.0470798049477112 A152 -L177 0.0466954956487098 A152 -V174 0.0450047389836303 M145 -F179 0.0425714742854089 G144 -G178 0.040700024201155 M145 -I153 0.0368710233140592 A152 -L175 0.036515391515541 V154 -A173 0.0356105412792802 A150 -R166 0.0356000883075369 V154 -A171 0.0352996131306664 I153 -A171 0.0351533623853557 V146 -I170 0.0312316823266352 A148 -A171 0.0274077204416856 V155 -E165 0.0272871655013185 V155 -I168 0.0222904655222358 M145 -G178 0.0217315291907232 A157 -I168 0.0193975778717381 D149 -F179 0.0192181958602786 L151 -L175 0.0169488990168922 L151 -F176 0.0166682689653233 I153 -I170 0.0165030472717103 A148 -L177 0.0161860876323328 D149 -A171 0.0160534567058135 I158 -V174 0.0158461317474492 I153 -F176 0.0141584182856314 L151 -G178 0.0136840041992254 V146 -F176 0.0113547610166042 G156 -V174 0.0094153581485763 L151 -M167 0.00854493416909641 A148 -G178 0.00667138313014703 A152 -M167 0.00583098865722365 V155 -A173 0.00583033341431083 M145 -V174 0.00510492913087646 I153 -A173 0.00315975419924341 M167 -A172 0.00175629806434952 I168 -G178 0.000927982762278567 G144 -L175 0.000428998447270401 V174 -F179 -0.000112515542792568 P164 -A173 -0.00111833263668326 M145 -A171 -0.00228241635423565 A147 -V155 -0.00259539022822697 A147 -M167 -0.00392910193614782 A157 -Q169 -0.00450143071699483 A152 -I168 -0.00765497330413645 A147 -G156 -0.00842299104528355 D149 -G178 -0.00960415446218366 A148 -G156 -0.0104926027106034 L151 -A173 -0.0109071274043255 A152 -Q169 -0.013960526620072 I153 -G178 -0.0143300662142387 I158 -M167 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