[Fri Aug 26 17:01:34 2016] >Input file: TMA1B7Y5M1D.pdb >TM segments: 41-67_ 82-110 MAIDEN score = -4.1328 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I100 -A109 0.775393275093744 V50 -V55 0.766827944007114 Y62 -F83 0.761588714815943 I47 -F53 0.631625730942811 L45 -T51 0.547301606455445 L44 -A49 0.543831628166733 I100 -A105 0.523768872678909 I100 -L106 0.487638286617396 P94 -A99 0.487048432450765 I100 -A108 0.412972870914432 L82 -R87 0.381208592244745 L45 -V50 0.351404098162297 A101 -L107 0.347466919419991 G48 -F54 0.34617479922342 A101 -A108 0.304299644570825 G52 -G60 0.29983001834392 A99 -I104 0.297957121512348 A101 -L106 0.296732746248099 V97 -L110 0.292389005890414 G93 -L110 0.264603916978698 G93 -A101 0.253788319866117 G61 -S67 0.23631820354462 V96 -I104 0.232832161341548 P41 -T51 0.22294238566033 G90 -V96 0.220691154485415 P41 -L110 0.216682571405165 I47 -G52 0.215435080901608 V46 -T51 0.204363547000086 I104 -A109 0.2036969013646 P41 -G52 0.201744885987214 F83 -G90 0.200841748098513 G86 -G93 0.196681044463063 G63 -N84 0.19564079400384 Y62 -R87 0.191951120825315 G60 -F83 0.186409697666075 G60 -S67 0.175818162382247 N56 -F83 0.172321385812105 L82 -G90 0.16871772475979 M59 -R87 0.166134947891941 A49 -G60 0.163155011351277 H43 -F54 0.162037339242177 L44 -V50 0.16039793533473 R87 -P94 0.155939092559395 V46 -F54 0.154436723637358 V96 -A105 0.151957870478613 G48 -G57 0.150294801077762 G90 -V97 0.148350998619383 G60 -N84 0.14618555721025 M58 -I85 0.144163747838611 G61 -I66 0.137537418290195 N56 -N84 0.136780645770847 M58 -I66 0.135713076699005 M58 -L82 0.128601075045314 A101 -L110 0.128576616683363 V96 -L110 0.128140648641362 G52 -G61 0.126673024044978 M58 -R87 0.125405466075185 V89 -L95 0.124033194225687 N56 -A64 0.119605022122937 L95 -L110 0.117424255950102 Y62 -G86 0.115794666812969 S91 -A109 0.11528844561844 S91 -A99 0.114991897821206 L65 -L82 0.113898201923379 V55 -G86 0.109359876180594 A64 -L82 0.109244266311233 V50 -G90 0.107075336400529 G98 -A109 0.106708514238628 Y62 -I85 0.105237272639042 I47 -G57 0.103618339345801 M59 -S67 0.103072254144303 A88 -P94 0.102642846982029 V50 -G60 0.102478383311064 I42 -G48 0.101303824915786 I85 -S91 0.100265109142447 N84 -S91 0.0988551539445508 L45 -L110 0.0976163790531701 P94 -L110 0.0961768974932484 A88 -L95 0.0928985826716053 V55 -A64 0.0927262670579365 A88 -V96 0.0919662407094486 L95 -A109 0.0911205408842006 M58 -L65 0.0907146973742542 I42 -L107 0.0885179050663705 A49 -M58 0.0881216812736536 A103 -L110 0.0856307311162987 L45 -G52 0.0840957294764824 V55 -Y62 0.083238950542825 P94 -A103 0.0830498330962381 G61 -G86 0.0825508500361665 G57 -F83 0.0798743196434319 T51 -G90 0.079588461650685 G98 -L107 0.0794979049415994 V96 -A108 0.0792866200999738 V55 -G63 0.0776673493317093 V55 -I85 0.0767300244622162 I85 -G93 0.0752263577765744 L95 -I104 0.0747786113147129 P41 -L106 0.0744603255533296 M58 -F83 0.064255118564704 G61 -N84 0.0639042395709524 G90 -G98 0.0613487623362057 V89 -V97 0.0602890919020656 P41 -A109 0.0599283635836287 T51 -N56 0.0592535714965674 V50 -R87 0.0591407309123457 I66 -L82 0.057689939920045 S91 -G98 0.0566504474483929 F92 -I100 0.0555532312971785 G63 -L82 0.0549101701559876 T51 -R87 0.0542194346303466 I66 -F83 0.0527954133597159 V50 -G86 0.0522321880129211 V55 -G90 0.0520437122141626 I47 -F54 0.050907263127788 H43 -V50 0.05039021821172 P94 -A105 0.0485841028496532 V46 -N56 0.0455692856216157 H43 -G52 0.0449206805648341 L44 -T51 0.0429545181426079 L45 -V55 0.0423861711583804 G93 -L106 0.0350092249015543 H43 -F53 0.0349602580511057 F53 -G61 0.033669237499967 I42 -L110 0.0334136966738283 I100 -L107 0.0333875011405396 G48 -V55 0.0315025154631101 F54 -M59 0.0303046005497567 G48 -M58 0.0302671133496883 L44 -F53 0.0298925776249306 I42 -G52 0.0294462900957213 A88 -V97 0.0288342559494668 F83 -F92 0.0282895101716782 F54 -R87 0.0249668205412394 A49 -M59 0.0239907742256651 A99 -L107 0.023100514759073 M58 -A88 0.0230362797142916 A49 -F54 0.0219837748261931 N84 -F92 0.0203008470836359 P41 -V50 0.0200643482966041 V55 -N84 0.0190669712825908 N56 -G63 0.0185417097154756 T51 -M59 0.0160926378941033 G57 -L65 0.0150961557142884 H43 -T51 0.0134549825884536 N56 -R87 0.0116617600032911 G52 -M59 0.0112567952208176 I42 -A49 0.0111812859534428 F83 -S91 0.00985947261632397 P94 -L107 0.0076902647126591 I47 -N56 0.00389587446867901 L82 -V89 -0.00147991849586759 V97 -A108 -0.00189522830798672 G98 -A108 -0.00309900572204302 A64 -F83 -0.00412242572495214 F92 -A101 -0.00516977915274541 G57 -Y62 -0.00626354239927962 P41 -A49 -0.0119585884978251 M59 -G86 -0.0124877447962906 P41 -G48 -0.0127489705093788 A99 -L110 -0.0135978389263096 V46 -V55 -0.0153811435752242 T51 -S91 -0.0154201909916036 F92 -A99 -0.015564570386907 G90 -L95 -0.0163426919591991 F54 -F83 -0.017250107793064 P41 -L107 -0.0178338448560282 P94 -A108 -0.0186795853429949 M58 -G63 -0.0192357743298976 V46 -G52 -0.0196518493146332 V50 -M59 -0.0207375540133689 V55 -A88 -0.0220714900187242 G48 -N56 -0.0223570156802888 G61 -L82 -0.0231609867167251 V96 -L107 -0.0276145223117297 G93 -A102 -0.0288798964747814 G60 -R87 -0.0292184789081338 M58 -G86 -0.0325718352521269 L95 -L106 -0.0340770631706295 G93 -A108 -0.0343618572227351 V50 -G57 -0.0360441376468543 P94 -L106 -0.0398500130445747 I100 -L110 -0.0404200507846344 G93 -G98 -0.0415525981613745 M59 -I85 -0.044181764226009 G57 -I66 -0.0451414561310159 A49 -N56 -0.0458482324685582 F54 -G90 -0.050741887230525 M59 -I66 -0.0523634187790312 V50 -M58 -0.0524311377270825 F54 -G63 -0.0527325502497232 F54 -G86 -0.0528770088948026 G60 -L82 -0.0551135784079841 I42 -I47 -0.0615427915669899 M59 -A88 -0.0627008517969616 L44 -L110 -0.0632215161724332 S91 -L110 -0.0638096567375204 P94 -I100 -0.065394405500788 I42 -F53 -0.0722185868519112 T51 -G60 -0.0724772746512216 G93 -A109 -0.0736482684058403 A49 -G57 -0.074424500239783 V55 -S91 -0.0776879710815745 M59 -L82 -0.078576202261055 G57 -A64 -0.0792747579013318 A102 -L107 -0.0805234133042596 L95 -A102 -0.0827919397010586 Y62 -L82 -0.08443720253661 L44 -V55 -0.0874042677702427 N56 -L65 -0.0885074061076945 G98 -A105 -0.0901474439396215 G52 -M58 -0.0913163795435739 P94 -A101 -0.0914728770413502 V50 -S91 -0.0924288889767115 V50 -G61 -0.0930241560539944 Y62 -S67 -0.0963216541435523 F53 -Y62 -0.0979491044432272 V89 -V96 -0.0985276707632623 G57 -N84 -0.0997543706343933 F53 -M58 -0.100439539609491 V55 -F83 -0.100640514863096 G61 -R87 -0.102071541266055 I85 -G90 -0.104018520386223 A102 -L110 -0.106384743857735 L95 -A103 -0.106715345612675 N84 -G90 -0.108045055622558 G57 -G63 -0.110497719165754 V55 -R87 -0.112149688005903 V89 -P94 -0.112156672179706 V55 -G61 -0.11222975138862 M59 -F83 -0.11433288635713 L45 -F53 -0.11525842384105 G63 -F83 -0.11719089449231 L44 -F54 -0.117689922355153 P94 -A109 -0.120196122341945 A88 -G93 -0.120336751381358 L95 -A108 -0.122566420705948 G98 -L110 -0.122683589284967 V46 -F53 -0.123670670014363 P94 -I104 -0.126200254627362 G86 -F92 -0.126293633777855 H43 -A49 -0.128158100647488 F54 -Y62 -0.130305818556979 L45 -F54 -0.132128549598976 F54 -G60 -0.133221277518238 F54 -G61 -0.134665338894587 R87 -F92 -0.135683929836904 P94 -A102 -0.135801011110218 L44 -G52 -0.139023877587414 G60 -L65 -0.143315988029482 F53 -G60 -0.146509652892469 V97 -A105 -0.148704927835523 F92 -G98 -0.150106268149536 V50 -N56 -0.152146660013786 N84 -V89 -0.154664754206357 I47 -V55 -0.155553509365864 M58 -G90 -0.159001386283892 I42 -T51 -0.163605206027923 L65 -F83 -0.163812815968696 A99 -A109 -0.163973160036646 G61 -F83 -0.164068162332311 M59 -N84 -0.166999506217204 F92 -A109 -0.16737438852592 G57 -R87 -0.171436434293125 L45 -N56 -0.175435709303305 R87 -G93 -0.177748361411984 A103 -A109 -0.182801289573473 N56 -G61 -0.183486996119832 L82 -S91 -0.186159317087157 A49 -V55 -0.195490415129445 A103 -A108 -0.195750709141119 A99 -A108 -0.19584680264209 V96 -L106 -0.197814209728536 H43 -G48 -0.200488750521448 A99 -A105 -0.201179981235576 M58 -N84 -0.202821143080327 G98 -L106 -0.203719419274826 G98 -I104 -0.203731542141972 I85 -F92 -0.209420845425667 A101 -A109 -0.211519272172997 P41 -V46 -0.213473467741756 I104 -L110 -0.217508916431528 I42 -V50 -0.217881809965736 A102 -A108 -0.219274223475573 G48 -M59 -0.226871814010907 M59 -A64 -0.229593762481215 F54 -N84 -0.238215312699965 T51 -G57 -0.240595313951856 V55 -G60 -0.245863684236669 G93 -A99 -0.24614142021119 V97 -L107 -0.254004040734913 G86 -S91 -0.254566439713265 S91 -V97 -0.259315950393382 L95 -A101 -0.260651341273102 V96 -A103 -0.26125756730365 M59 -L65 -0.278350156821003 F53 -M59 -0.279175717942251 G93 -I100 -0.280470527756317 P41 -I47 -0.281832873415161 F92 -V97 -0.284796553397715 L82 -A88 -0.287626153911989 S91 -V96 -0.295316390003116 F83 -V89 -0.295927414876003 M58 -A64 -0.297025556294493 G60 -I66 -0.298016317620748 A105 -L110 -0.303089478008408 Y62 -N84 -0.30708294034963 T51 -M58 -0.319289496533248 A99 -L106 -0.320230556785543 V97 -I104 -0.324366282123631 V97 -L106 -0.327346448096289 G48 -F53 -0.331205818805964 V97 -A103 -0.337153490763734 G52 -G57 -0.338531672551527 G98 -A103 -0.341933072766796 F83 -A88 -0.355092032767761 V96 -A102 -0.366660457795454 A102 -A109 -0.367990917111576 L95 -I100 -0.371491365207511 V96 -A101 -0.398849773288547 V97 -A102 -0.400532182255361 V97 -A109 -0.431076312869056 V96 -A109 -0.43626615847856 N56 -Y62 -0.441316584637154